Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0562 |
Symbol | |
ID | 7972972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 621124 |
End bp | 621606 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644791165 |
Product | hypothetical protein |
Protein accession | YP_002942491 |
Protein GI | 239813581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAAG TCACCCGCCC CCGCAACGAG AAAGGCGAGT TCCTCGTCGA CTACGAAGAG AAGGTGTTCG AAGACGTCAA GGCCGAGCCC GGCGAGAAGG CGCTCGTCAC CTTCCACACG GTGGCCTTCG AGGGCTCGAT CGGCTTCGTG AACCTGCTGC AGGCCACGCG CCTCAGGCGC AAGGGCTACG AGACCTCGGT GCTGCTGTAC GGCCCCGGCG TGACGCTGGG CGTGCAGCGC GGCTTTCCGA CGCTGGGCGA CGAGGCCTTT CCGGGTCACC AGAACTTCAA CAAGCAGATC GGCAAGTTCA TGGAGGAAGG CGGCAAGGTG TATGCGTGCC GCTTCGCGCT GCAGGCGCTG TACGGCCACG GCGAGGGCGC GCTGATCGAG GGCATCACGC CGATCAACCC GCTCGACGTG CTGGACCTCG TGCTGCTGCA CAAGAAGGCC GGCGCCGTGA TCCTCGACAC CTGGACCCTG TAA
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Protein sequence | MPKVTRPRNE KGEFLVDYEE KVFEDVKAEP GEKALVTFHT VAFEGSIGFV NLLQATRLRR KGYETSVLLY GPGVTLGVQR GFPTLGDEAF PGHQNFNKQI GKFMEEGGKV YACRFALQAL YGHGEGALIE GITPINPLDV LDLVLLHKKA GAVILDTWTL
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