Gene Vapar_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0559 
Symbol 
ID7972969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp618448 
End bp619008 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID644791162 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002942488 
Protein GI239813578 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTGCA TCGACGACCT CAGCGAACTC GACCCGCACT ACGCGCCGGT CGAATACCTG 
GTGCGCGAAG CGGCGCAGCA GTGGGAGCGC GACGAAGCCA TGGCGCTGCG CCGTGCGGTG 
TTCTGCATCG AGCAGGGCAT CTTCGCGCGC GACGACCGCG ATGCGATCGA CAGCCATGCG 
CGGCTGCTGG TCGCCATGTC GTGCAACGGC GGCATGCCCG AGCAGGTGGT GGGCACGGTG 
CGCATCCACC GCGGCGAGGC GCCGGGCGAA TGGTGGGGCT CGCGCCTCGC GGTGCATCCC 
GCGTTCCGCA GCCAGGGCCA CCTGGGCGCC ACGCTGATAC GGCTCGCGGT GTCGCGCGCC 
AACGCGCTGG GCTGCGATGC GTTCTTCGCG CAGGTGCAGA TGCAGAACGT GCCGCTGTTC 
CAGAAGCTCG GCTGGCAGCT GCTCGACGAG AGCGCCATCC ATGGCCGTCC GCATGCGCGC 
ATGCAGGCCG GGCTCGCCTT CTACCCGCCC TGCCACGACC CGGTGAGCGG CTTCGTCACG 
CGCGCGAAGG GGCTGTCATG A
 
Protein sequence
MLCIDDLSEL DPHYAPVEYL VREAAQQWER DEAMALRRAV FCIEQGIFAR DDRDAIDSHA 
RLLVAMSCNG GMPEQVVGTV RIHRGEAPGE WWGSRLAVHP AFRSQGHLGA TLIRLAVSRA 
NALGCDAFFA QVQMQNVPLF QKLGWQLLDE SAIHGRPHAR MQAGLAFYPP CHDPVSGFVT 
RAKGLS