| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0494 |
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| Symbol | |
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| ID | 7972904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 535197 |
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| End bp | 535895 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791097 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_002942423 |
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| Protein GI | 239813513 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA CGCCGTTCCG CATCGCCCCC TCCATTCTCT CGGCCGATTT CGCCCACCTG
GGCGACGAAC TGGCCAAGGT CATCGCCGCC GGCGCCGACT GGATCCATTT CGACGTGATG
GACAACCATT ACGTGCCCAA CCTGACCTTC GGCCCGATGA TCTGCAAGGC CCTCAAACCC
TATGCCAGGA CGGCCGACGG CGAGGCGGTG CCGATCGACG TGCACCTGAT GATCCAGCCG
GTCGACGCGC TGGCCGCCTC CTTCGCGGAA GCGGGCGCCG ACTACATCAG CTTCCACCCC
GATGCCTCGC CGCACGTGAA CCGCAGCATC CAGGCCATCA AGGGCGCGGG CTGCAAGGCG
GGGCTGGTGT TCAACCCGGG GCTGGGGCTG GAGGCGCTGG ACTGGGCGAT CGACGACATC
GACCTGATCC TGATCATGTC GGTGAACCCC GGCTTCGGCG GGCAGAGCTT CATCGATTCG
GCGCTGCGCA AGATCGAACT CGCGCGCAAG CGCATCGAGC AGAGCGGGCG CGACATCCGC
CTGGAGGTGG ATGGCGGCAT CAAGGTGGAC AACATCGCGC GCGTGGCGTC GGCCGGCGCC
GACACCTTCG TGGCCGGCAG CGCGATCTTC AATGCCAAGG ACTACGCGGC GGTGATCTCG
TCCATGCGCG ACCAGCTGGC GGGCGTGGGC GGCAAATAA
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| Protein sequence | MSSTPFRIAP SILSADFAHL GDELAKVIAA GADWIHFDVM DNHYVPNLTF GPMICKALKP
YARTADGEAV PIDVHLMIQP VDALAASFAE AGADYISFHP DASPHVNRSI QAIKGAGCKA
GLVFNPGLGL EALDWAIDDI DLILIMSVNP GFGGQSFIDS ALRKIELARK RIEQSGRDIR
LEVDGGIKVD NIARVASAGA DTFVAGSAIF NAKDYAAVIS SMRDQLAGVG GK
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