| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0488 |
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| Symbol | |
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| ID | 7970229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 528459 |
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| End bp | 529088 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791091 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_002942417 |
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| Protein GI | 239813507 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACC ACCCCGCCCC GCGCCGCGCC CTCGTCGTGA TCGACGTGCA GAACGAATAC
TTCGAAGGCG GCGGCCTGCC CATCGAGTAC CCGCCGGTCG AAAGCTCGCT GCCGAAGATC
GCGCAGGCCA TGGACGCCGC GCGCGCGGCC GGCACGCCGG TGGTCGTGGT GCAGCACCAC
GCACCCAAGG GCGCGCCGGT GTTCCAGGCC GACACGCACA ACGGCCAGCT GCATCCGGAA
ATTGCCAGGC GGCCGCGCGA CCACCTCGTC ACCAAGACCT TGCCGAGCGT GTTCACCGGC
ACCGACTTTG CCGACTGGAT CGCGCGCCAC CAGATCGACA CGCTCAGCGT GGTGGGCTAC
ATGACGCAGA ACTGCGATGC CTCCACCGTG TTCGAGGCCA TGCACCGCGG CCTCAACGTG
GAGTTCCTGT CGGACGCGAG CGGCGCGCTG CCGTACTCGA ATGCGGCCGG ACAGGTCAGC
GCCGAGGAAA TCCACCGCGT CTTCAGCGTC GTGTTCCACA GCAACTTCGC GGCCGTGGCA
AGCACCGAGG CCTGGATTGC CGCGATGCAG GCCGGCCAGC CGATCGAGAA GGACAACGTG
GTGATGTCGA ACCGGCGCGC GCGGGGGTGA
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| Protein sequence | MSNHPAPRRA LVVIDVQNEY FEGGGLPIEY PPVESSLPKI AQAMDAARAA GTPVVVVQHH
APKGAPVFQA DTHNGQLHPE IARRPRDHLV TKTLPSVFTG TDFADWIARH QIDTLSVVGY
MTQNCDASTV FEAMHRGLNV EFLSDASGAL PYSNAAGQVS AEEIHRVFSV VFHSNFAAVA
STEAWIAAMQ AGQPIEKDNV VMSNRRARG
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