| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0478 |
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| Symbol | |
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| ID | 7970219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 519419 |
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| End bp | 521137 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791081 |
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| Product | ferredoxin-dependent glutamate synthase |
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| Protein accession | YP_002942407 |
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| Protein GI | 239813497 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACGA TTATTCCGTT TCCGACGCGC TACAGCGCCT TCGCCCTGTG CGTGGTCGGC
CTGGCGGCCT GCATCGCCCT GGTGCTGGTG TCGCCCCACC TGTGGCTGGC CTGGGTGGGG
GTGGCTATTT TCGCAGTGCT TTCGGGCACC GGCGTGCACG ACCTGCGGCA GGCCCGCCAC
GCGATCCTGC GCAACTACCC CGTCATCGGC CACCTGCGCT TCCTGCTCGA ATTCATCCGG
CCGGAAATGC GGCAGTACTT CATCGAGAGC GATTCCGAGG CCGCCCCGTT CTCGCGCGCG
CAGCGCTCGC TGGTGTACCA GCGCGCCAAG GGCGAGCCCG ACAACCGGCC CTTCGGCACG
CAGCTCGACG TGACCATCGC GGGCTACGAG TGGATCAACC ACTCGATGCA GCCCACCAAG
CTCGACAACC ACGATTTCCG CATCGTGATC GGCGGCACGC CGCACACCGC CGATGCCAGC
CCGCCGCCAT TGGGCGCGGC GTCGCACCAC CCCTGCACGC AGCCCTACAG CGCGAGCGTG
TTCAACATCT CGGCCATGAG CTTCGGCGCG CTGTCGGCCA ATGCGATCCT CGCGCTCAAC
CAGGGCGCCA GGCTGGGCGG CTTTGCGCAC GACACCGGCG AAGGCTCCAT CTCGCAGCAC
CACCGCGTGC ATGGCGGCGA TCTGATCTGG GAAATCGGCT CGGGCTACTT CGGCTGCCGC
AACGAGGACG GCAGCTTCAA CGCCGAGCGC TTCAGCGCCA ACGCGCGCGA TCCGCAGGTG
AAGATGATCG AGATCAAGCT GAGCCAGGGC GCCAAGCCCG GGCACGGCGG CGTGCTGCCG
GCACCCAAGG TCACGCCCGA GATCGCGGCC GCGCGCGGCG TGCCGATCGG CATCGACTGC
GTTTCGCCCT CGTCGCACAG CGCGTTCAGC ACGCCCATCG AGATGATGCA TTTCATCGCG
AAGCTGCGCG AGCTGTCGGG CGGCAAGCCG ACCGGCTTCA AGTTCTGCCT CGGCCATCCG
TGGGAGTGGT TCGCGATCGT CAAGGCCATG CAGGCGACGG GCATCACGCC CGACTTCATC
GTGGTCGACG GCGCCGAGGG CGGCACCGGC GCCGCGCCGG TCGAGTTCAG CGACCACGTG
GGCGCGCCGC TGCAGGAAGG CCTGCTGCTG GTGCACAACA CGCTCGTCGG CGTGAACCTG
CGCCACCGCA TCAAGCTGGG CTGCGCGGGC AAGGTGATCA CGGCCTTCGA CGTGGCGCGC
ATGATGGCGC TCGGCGCCGA CTGGTGCAAC GCGGCGCGCG GCTTCATGAT GGCCCTGGGC
TGCATCCAGG CGCAAAGCTG CCACACCGGC CACTGTCCCA CCGGCGTGAC CACGCAGGAC
CCGGTGCGCC AGCAGGCGCT GGTGGTGCCG ACCAAGGCCG AGCGCGTGCG CAACTTCCAC
CGCAGCACGC TGCATGCGCT GCAGGAGCTG GTGCAGGCCG CCGGCCTCGA CCATCCGCAG
CAGATCACGG CGCACCACAT CGTGCGGCGC ATTTCCGACA CCGAGGTGCG CCTCCTGAGC
AACCTGGTGA TGCAGGTGCA GCCGGGCGCG CTGCTCGGCC CGCTCGACAA GCAGCACAAC
GTGTTCCGCA CCTACTGGCC GCTGGCCAGC GCCGAGAGCT TCCAGCCCCT GACACAAGGA
CCGCACGGCC TGGTGTCGAA CCTTCCGCTG GCCGCATGA
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| Protein sequence | MPTIIPFPTR YSAFALCVVG LAACIALVLV SPHLWLAWVG VAIFAVLSGT GVHDLRQARH
AILRNYPVIG HLRFLLEFIR PEMRQYFIES DSEAAPFSRA QRSLVYQRAK GEPDNRPFGT
QLDVTIAGYE WINHSMQPTK LDNHDFRIVI GGTPHTADAS PPPLGAASHH PCTQPYSASV
FNISAMSFGA LSANAILALN QGARLGGFAH DTGEGSISQH HRVHGGDLIW EIGSGYFGCR
NEDGSFNAER FSANARDPQV KMIEIKLSQG AKPGHGGVLP APKVTPEIAA ARGVPIGIDC
VSPSSHSAFS TPIEMMHFIA KLRELSGGKP TGFKFCLGHP WEWFAIVKAM QATGITPDFI
VVDGAEGGTG AAPVEFSDHV GAPLQEGLLL VHNTLVGVNL RHRIKLGCAG KVITAFDVAR
MMALGADWCN AARGFMMALG CIQAQSCHTG HCPTGVTTQD PVRQQALVVP TKAERVRNFH
RSTLHALQEL VQAAGLDHPQ QITAHHIVRR ISDTEVRLLS NLVMQVQPGA LLGPLDKQHN
VFRTYWPLAS AESFQPLTQG PHGLVSNLPL AA
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