| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0472 |
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| Symbol | |
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| ID | 7970213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 514146 |
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| End bp | 515942 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791075 |
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| Product | histidine kinase |
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| Protein accession | YP_002942401 |
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| Protein GI | 239813491 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCCA CCACCGCGCC CATGGTTGCT CCGGCTGTCG CCGACGACGA TGGGCGCTTT
GCCATCCAGT GCGAGGTGCT GCGGCTGTCG ATCCGCCCGA TCGGGCCGGT GCTGCTGGCG
CAATACCTGC TGAACTGCGG CGTGGCGGCG CTCTTTGCCT GGCAGTATTC GCTTTCCCGC
GCACTGGTGT GGATTTCGCT CATCACCGCC GTGACGCTCA TGCGCGGCTT CTTTCCGCAG
CGCCTGCCCA CCCCCTTCAC CCCGCAAAGC CTGCGCGATG CGCAGCGCAC GCACACGGCG
CGCACCGGCA TCTGGGAGCT GGCGCACGGC CTGGCCGGCG TGCTGCTGTT CAACCCCGCC
CAGCCCGAGC AGCAGCTGCT GCTCGGGCTG ATGCTGATGG GCATGACGCT GTCCTCGGCG
TTCTCGGTGT CCTTCTACGT TCCGGCCACG CAGCTGGCGA TCACGCTGCT GCTGGCGCCG
GTGATCGTGA CCGGCCTCTG GCTGGGCGCG CCGGCCATGA AGGCGGTGGC GCTCATCGGC
ATCGGCCTGA CCGCGATGAT GTGGAAGCTG GTGGCCGAGC ATTCGCGCCA GCTCGAGGAA
AACATCGGCT TGCGCCTCAA TGAACGCAGC CTGCGCGAGC AGGCGCTGGC CGGGCTGCGC
GCCTCCGAGC AGGCGCAGGC CGAGCGGCTG CGCTTCTTCT CGGCCGCCAA CCACGACCTG
CGCCAGCCGG TGATGGCCAT CGGCCTGCAG GCCGAGGTGC TGCGCCAGCA GCTGGACAAC
GGCGCCGATG CGCCCGTGGT GCAGCACACG GTGGCCTCGC TCGCGCGCGC GCAGCAGGCG
CTCGAAGGCC TGACCAACCA GCTGCTCGAG ATCGGCCGCA TCGAGGCCGC GGCCGATCCG
CTGCAGCCGG TGGCGGTGCC GCTGGCGCCG CTTTTGGCCG ACCTCGCGCG CCAGGCCGGC
AATGGCCGCG TCACGGTGCG CTGCCCCGCC GATGCGGTGG GCTGGGCCGA TGCGGTGTCG
CTGCGCCGCG TGCTGGCGAA CCTGGTCGAC AACGCCGTCA AGTTCACGCC GCGCGGCCGG
GTGCTGCTGG CCGTGCGCGC ACGCCAGCGC GACACCGGGC GCGCCTGGCG GGTGGAGGTG
CGCGACAGCG GCATCGGCAT TGCGGCGGAC TCGCAGGAGC GCGTGTTCGG CGACTTCGAG
CAGATCGGCA ACGTGGAGCG CAACCTGCAG CGCGGCCATG GGCTGGGCCT GGCGATCGTG
CGGCGGCTGG CCGCGCAGCT CGGCATCCAG GTGTCGCTGC GTTCGGCGCC GGGGCGGGGC
TCGGTGTTCG GCTTCGAGCT GCCCGCGGCG CCGGCCGATG CGCCGGTGGC GGCTCCCGCG
CCCGCGGCGC AGCCCCGGTC CGGCGCGGCG CACGCCCTGC GGCCCGGCCT GGCCGTGCTG
GTGGTGGAAG ACAACGCCGT CGTGGCCGAC AGCCTCGGCG CGCTGCTGCA GCAATGGCAG
CTCGCGCCGC GCGTGTACGC CAGCGCGGCC GAGGCGCTGG CGCTGGCCGA CCTGCGCGCG
CTCGACGTGG CGCTGTGCGA CATCCGGCTG CCGGGCGCGC TCGACGGCAT CGCGCTGGCG
GAACGGCTGC AGCGGCAGAA GCCCTCGCTC GCCATCGCGC TGGTCTCGGC CGACATCGGC
GAAGCCACCC AGCGGCTGGC CGCGGAGCGC GGCTGGCATG CGCTGCGCAA GCCGGTGCAG
CCGGCCGAGC TGCATGCGGT GCTGGTGCAG GCGCAGCAGG CGGCATCGGG GCGCTGA
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| Protein sequence | MNSTTAPMVA PAVADDDGRF AIQCEVLRLS IRPIGPVLLA QYLLNCGVAA LFAWQYSLSR
ALVWISLITA VTLMRGFFPQ RLPTPFTPQS LRDAQRTHTA RTGIWELAHG LAGVLLFNPA
QPEQQLLLGL MLMGMTLSSA FSVSFYVPAT QLAITLLLAP VIVTGLWLGA PAMKAVALIG
IGLTAMMWKL VAEHSRQLEE NIGLRLNERS LREQALAGLR ASEQAQAERL RFFSAANHDL
RQPVMAIGLQ AEVLRQQLDN GADAPVVQHT VASLARAQQA LEGLTNQLLE IGRIEAAADP
LQPVAVPLAP LLADLARQAG NGRVTVRCPA DAVGWADAVS LRRVLANLVD NAVKFTPRGR
VLLAVRARQR DTGRAWRVEV RDSGIGIAAD SQERVFGDFE QIGNVERNLQ RGHGLGLAIV
RRLAAQLGIQ VSLRSAPGRG SVFGFELPAA PADAPVAAPA PAAQPRSGAA HALRPGLAVL
VVEDNAVVAD SLGALLQQWQ LAPRVYASAA EALALADLRA LDVALCDIRL PGALDGIALA
ERLQRQKPSL AIALVSADIG EATQRLAAER GWHALRKPVQ PAELHAVLVQ AQQAASGR
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