Gene Vapar_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0471 
Symbol 
ID7970212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp513426 
End bp514055 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content71% 
IMG OID644791074 
Productcytochrome B561 
Protein accessionYP_002942400 
Protein GI239813490 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG ACGCCCCCTC CCACCCCGCC GCCATGGCCG ATGCGCCCGC CGATCCGCGC 
GGCCTGCGCG AACTGCGTTA TGGCCCGGTC GCCATGGCGC TGCACTGGCT GCTCGCGGCC 
ATGATCGTCG GCTCGCTCGG CGTCGGCCTC TACATGACCG GCCTGCCGCT CTCGCCGGCG 
CGCATCAAGC TCTACAACTG GCACAAATGG GCCGGCGTGA CGATCCTGCT GCTGTCGGCC 
GTGCGCCTGC TGTGGCGGCT GCGCCATCCG CCGCCGCCGC TGCCGGCCGA AGCGGCGGCG 
GCCATGCCGC GCTGGCAGCG CAGCGGTTAC CGCGCGAGCC ACGCGCTGAT GTACCTGCTG 
TTCCTGGCGG TTCCGCTGTT CGGCTGGGCC TACAGTTCGG CGCTGGGCTT TCCGGTCGTG 
TGGTTCGGCG TGCTGCCGCT GCCCGACTTC GTGGCGGTCG ACAAGGAATG GGCCGAGGCC 
GTGCTCAAGC CGCTGCACAA GGGCAGCGCC TTCACGCTGG CCGCGGTGGC GCTGCTGCAC 
GTGGCGGCGG TGCTCAAGCA CCACTGGATC GACCGCGATG GCATCTTGAA ACGCATGTGG 
CCCGCGCCAC GCAAGGAATC CGCCGGATGA
 
Protein sequence
MSIDAPSHPA AMADAPADPR GLRELRYGPV AMALHWLLAA MIVGSLGVGL YMTGLPLSPA 
RIKLYNWHKW AGVTILLLSA VRLLWRLRHP PPPLPAEAAA AMPRWQRSGY RASHALMYLL 
FLAVPLFGWA YSSALGFPVV WFGVLPLPDF VAVDKEWAEA VLKPLHKGSA FTLAAVALLH 
VAAVLKHHWI DRDGILKRMW PAPRKESAG