| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0457 |
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| Symbol | |
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| ID | 7970198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 499245 |
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| End bp | 500189 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791060 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942386 |
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| Protein GI | 239813476 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGCC TGAAGCAACT CGAATCCTTC GTCTCGGTGG CGACCCGCGG CGGTCTCACG
GCCGCGGCCA AGGCCGAGGG CGTGGCGCCC GCGATCATGG GGCGGCGGCT CGATGCGCTC
GAGGCGCGGC TGGGCGTCAA GCTGCTGGTG CGCACCACGC GGCGCATCAC GCTCACGCAC
GAAGGCAGCG CCTTTCTCGA GGACTGCCAG CGCCTGCTGA CCGAATTCGC CAATGCCGAG
GCCAGCGTGA GCGCCGGCGG CGTCAAGGCC AGCGGCCACC TGCGCGTGAC GGCGCCGGCC
GGCTTCGGCC GCCGCCACGT GGCGCCGCTG GTGCCGCGCT TCCATGCGCT GCACCCGGAG
GTCACGATCT CGCTCAACTT GAGCGACCGC GTGGTCGACG TGCGCGGCGA GAGCTTCGAT
TGCGCGGTGC GCGTGGGCGA CATGCCCGAC TCGTCCTTGG TCAGCGTGCG GCTGGCCGAC
AACCGCCGCC GCTGCGTCGC CACGCCGGAG TTCGTGCGCC GCCACGGCAT GCCGCGGCAT
CCGAACGAGC TGTCGCGCTT TGCCTGCCTC ACGCTGTCGA GCGATGCGTC GCAAACGCGC
GGCTGGGCAT TCCGAATTCC GCGCGCCCCG GCGGCTGCCG GCGAGGAGGC CGGCGAAGAA
CTGATCTACC TGCGGCCCGA AGGCCCGCTC GATTGCTCCG ACGGCCAGGT GCTGCACGAC
TGGTGCCTGG CCGGCCACGG CATCGCGTGG CGCAGCACCT GGGAAGTGGA GGCCGAGATC
GATGCCGGCC TGCTGGTGCC GCTGCTCGAT GAATTCGCCG CGCCGCCCAA CGGCATCTAC
GCGGTCTTCG CGGGCACCAA GCACCTGCCG CTGCGGGTGC GGCTGTGGCT TGATTTCCTC
AAGGAGCAGT ACGGACGGCC CGAATTCTGG GGCGGCAGGG CGTAA
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| Protein sequence | MDRLKQLESF VSVATRGGLT AAAKAEGVAP AIMGRRLDAL EARLGVKLLV RTTRRITLTH
EGSAFLEDCQ RLLTEFANAE ASVSAGGVKA SGHLRVTAPA GFGRRHVAPL VPRFHALHPE
VTISLNLSDR VVDVRGESFD CAVRVGDMPD SSLVSVRLAD NRRRCVATPE FVRRHGMPRH
PNELSRFACL TLSSDASQTR GWAFRIPRAP AAAGEEAGEE LIYLRPEGPL DCSDGQVLHD
WCLAGHGIAW RSTWEVEAEI DAGLLVPLLD EFAAPPNGIY AVFAGTKHLP LRVRLWLDFL
KEQYGRPEFW GGRA
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