| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0451 |
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| Symbol | |
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| ID | 7970192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 492005 |
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| End bp | 493132 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644791054 |
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| Product | protein of unknown function DUF1016 |
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| Protein accession | YP_002942380 |
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| Protein GI | 239813470 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4804] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.319845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAGAGA TCCTGGATAC CGCGCGTGCC GGTGTGGCAC GGACGGTCAA CACGACACAG
GTCGCAGCCA ACTGGTTGAT CGGGCGCGAG ATCGTCGAGG AAGAGCAGAG AGGGCAGCGC
CGAGCGGGCT ATGGTGCCAG GCTGCTCGCT GATCTGTCGA CGCGCCTGAA TGCTGAGTTC
GGCCGCGGTT ATTCCGTGGA CAACCTCGAA GCGTTCAGGC AGTTCTATCT GGACTATCCG
CAACTGATTT CCGAGACGGC GTCTCGGAAA TCGACCACGC CAACGGCGTT GCCTCTTCAG
GTCAGTTCCG AGACATCGTC TCGGAAATCC GAAGGCGACA CGGACTGGTG CCCCGGAGCG
CTGCATCCGT CTCTTTCATG GAGTCACTAC CGCCAACTCT TGCGTGTGGC GAGGCCGGAA
GCGCGTGCCT TCTACGAAAT CGAAGCGATC CGAAACGCGT GGTCCGTGCG TGAGCTCCAG
CGCCAGACGG CCAGCCTGCT GTACGACCGT TTGGCAAAAA GCAAGGACAA GAAGGGCCTG
ATGCGATTGG CAACGCATGG CCAGGAAGTG ATGCAGCCGC TCGATGTGTT GAAAGACCCG
GTGGTCATCG AGTTCCTCGG CCTGCCGGAG TCCCCGAGGT TGGTCGAGTC CAAGCTGGAG
CAGGCGCTCA TCGACAACCT GCAGACTTTC CTGCTCGAAC TGGGCAAGGG TTTTGCATTC
GTGTCGCGCC AGGAGCGTAT CACCATCGAC GGCGACCATT TCTATATCGA CCTGGTCTTC
TATCACGCGG TGCTCAAGTG CTATGTGCTC ATCGATCTCA AGGTCGGCAA GTTGACTCAT
GGCGATCTCG GCCAGATCCA GTTCTATGTG AACTACTACG ACCGCGAGCG TCGAACCGAA
GGCGACAACC CGACGCTGGG TGTGATCCTT TGCCCGGACA AGAACGATGC CGTGGTGAAG
TACACCTTGG GCGAGCAGCA GGAGCGAAAT ATCTTCGCCA GTCGCTACCA ATTGCATCTG
CCGACCGAGC AGGAACTCGA GCGAGAGTTG CGCCGTGAAA TCCGGCAGTT GTCCGTGGCA
ACGCCGCTCA AGATGCCCCC AAGAAAAAAG GCCGGACCGG ACGCATAA
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| Protein sequence | MREILDTARA GVARTVNTTQ VAANWLIGRE IVEEEQRGQR RAGYGARLLA DLSTRLNAEF
GRGYSVDNLE AFRQFYLDYP QLISETASRK STTPTALPLQ VSSETSSRKS EGDTDWCPGA
LHPSLSWSHY RQLLRVARPE ARAFYEIEAI RNAWSVRELQ RQTASLLYDR LAKSKDKKGL
MRLATHGQEV MQPLDVLKDP VVIEFLGLPE SPRLVESKLE QALIDNLQTF LLELGKGFAF
VSRQERITID GDHFYIDLVF YHAVLKCYVL IDLKVGKLTH GDLGQIQFYV NYYDRERRTE
GDNPTLGVIL CPDKNDAVVK YTLGEQQERN IFASRYQLHL PTEQELEREL RREIRQLSVA
TPLKMPPRKK AGPDA
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