| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0442 |
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| Symbol | |
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| ID | 7970183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 484113 |
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| End bp | 484475 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644791045 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002942371 |
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| Protein GI | 239813461 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAGCC TGGGAGAGGT TGCCCCATTC ATTTGCGTCC CGCTCGATCA AGTGGATCTC
GGTTTCCTTG TGCGAGCCGA TGCGGGCAAT GCCGATGCGC AGAACGACAT CGGACAATTA
TTTTCAAACG CAGGCAAGCC AACGGTCGCC CTGTACTGGC TCGAACAAGC CGCGCATCAG
GGCCATGCGG ACGCCATGCA GTGGTTGGGC CGCTGCTACA TCGGCGGCGA AGGCGTGCCT
AAAAACAGGA ACATCGGCTT GATGTGGATT GCAAAGGCGG CCGCGCATGG CCACATCATC
GCGCAGGCCC AGATGCAGGA CTCGTTTCGC ATTCCGCCGG CGAACGGCCT GAAGCGGATC
TAG
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| Protein sequence | MLSLGEVAPF ICVPLDQVDL GFLVRADAGN ADAQNDIGQL FSNAGKPTVA LYWLEQAAHQ
GHADAMQWLG RCYIGGEGVP KNRNIGLMWI AKAAAHGHII AQAQMQDSFR IPPANGLKRI
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