| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0412 |
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| Symbol | |
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| ID | 7970153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 445144 |
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| End bp | 446631 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791015 |
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| Product | glycogen/starch synthase, ADP-glucose type |
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| Protein accession | YP_002942341 |
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| Protein GI | 239813431 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.724768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATCC TCCAGGTCAG CGCCGAACTC TTCCCCCTGC TCAAGACCGG TGGCCTCGCC
GACGTGGCCG GCGCGCTGCC GCTCGCGCTC ATGGCCGCCG GACAGGACGC ACGCGTGCTG
CTGCCCGGCT TTCCGGCCAT CCTGGCCGGC GTGCGCGAGC TGGCGCCCGT GGCCGAATTC
ACGGCGCCCT GGGGCCCGGA ACGCTTCGGC CTGCGCGCGG GCCGCATCGC CATCGACGGC
GCGGCGGCGC CGATCACCGC CTACGTGATC GATGCGCCCG TGCTCTACGA CCGGCCCGGC
AACCCTTATG AAGACGCCAC GCGCCAGCCC TACGGCGACA ACCACCGGCG CTTCGCGCTG
CTGGGCTGGG CCGCGGCGCA GCTGGCGCAG GGGCTCGATC CCGCCTGGCA GCCCGAGGTC
GTGCATGCGC ACGACTGGCA TGCGGGGCTG GCGCCGGCCT ACCTGCACTT CGCGCGCGAG
GCCGGCTTGA CCCGCACGGG CAGCGTGTTC ACGGTGCACA ACCTGGCCTA CCAGGGCATC
TCGGCGCCAT GGAACTTTGC CGATCTCGGC CTGCCCGCGC CGGCGTTCCA CATGAACGGG
CTCGAATACC ACGGGCAGGT GTCCTTCATG AAGGGCGGCC TCTACTTTGC CGACCGCCTG
ACCACCGTGA GCCCGACCTA CGCCCGCGAG ATCCAGACGC CCGAGCAGGG CTTCGGCCTG
GACGGCCTGC TGCGCCTGCG CGGCGGCGTG CTCACGGGCA TTCTCAACGC GGTCGACGAC
GAGGTCTGGA ATCCGGCCAC CGACAGCGCG CTGGTGCAGG GCTACCACAC GCCCGACGGC
CGCCACATGG CGGGCAAGGC GCGCTGCAAG GCCGTGCTGC AGCACCAGCT CGGCCTGGCC
GAGCGCCCCG ATGCGCCGCT CTTCATCCTG GTGAGCCGGC TCACCGAGCA GAAGGGCCTG
CACCTCGTGC TCGGCGGCCT CGACACCCTG CTGGCCGAAG GCGGCCAGCT CGCGCTGCTG
GGCAGCGGCG AGGCCGGGCT CGAGCAAGCC TTCCGCGAGC GCGCGGCGGC CGCGCCGCGC
GCGGTCAGCG TCACCATCGG CTACAACGAA ACGCTCGCGC ACCAGCTCTT CGGCGGCGGC
GACGTGACGC TGGTGCCCTC GCTGTTCGAG CCCTGCGGCC TCACGCAGAT GTACGGACTC
AAGTACGGCA GCCTGCCGCT GGTGCGCCGC GTCGGCGGCC TGGCCGACAC GGTGGTCGAC
TGCACGCTCG AGGACATGGC CAGCGGCCAT GCCACCGGCT TCGTCTTCGA CCGCTTCGAT
GCCGCCGACT ACGATCGCGC GCTGCGGCGC GCCTTTGCGC TCTACCAGCG CGCGCCCGAC
TGGCGCCGCG TGCGCGGCAA TGCCATGCGG CGCCCGGCCG ACTGGGCCAG CGCCGCCGGC
CAGTACATCG AGGTCTACCG GCAGGCGCTC GAGTCCGCCG GCACCTGA
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| Protein sequence | MRILQVSAEL FPLLKTGGLA DVAGALPLAL MAAGQDARVL LPGFPAILAG VRELAPVAEF
TAPWGPERFG LRAGRIAIDG AAAPITAYVI DAPVLYDRPG NPYEDATRQP YGDNHRRFAL
LGWAAAQLAQ GLDPAWQPEV VHAHDWHAGL APAYLHFARE AGLTRTGSVF TVHNLAYQGI
SAPWNFADLG LPAPAFHMNG LEYHGQVSFM KGGLYFADRL TTVSPTYARE IQTPEQGFGL
DGLLRLRGGV LTGILNAVDD EVWNPATDSA LVQGYHTPDG RHMAGKARCK AVLQHQLGLA
ERPDAPLFIL VSRLTEQKGL HLVLGGLDTL LAEGGQLALL GSGEAGLEQA FRERAAAAPR
AVSVTIGYNE TLAHQLFGGG DVTLVPSLFE PCGLTQMYGL KYGSLPLVRR VGGLADTVVD
CTLEDMASGH ATGFVFDRFD AADYDRALRR AFALYQRAPD WRRVRGNAMR RPADWASAAG
QYIEVYRQAL ESAGT
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