| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0390 |
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| Symbol | |
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| ID | 7973534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 421232 |
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| End bp | 421945 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790993 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002942319 |
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| Protein GI | 239813409 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.708283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTG CAGTACTTGA TCACGAGCCC GATCAGCTTC GGCTGATCGC CGAGGCGATG
TCGGGGCTCG GCCACGAATG TCACTCGTAC ACCGAAGGGC GTCCCTTGCT CCAGGCGCTG
CGCCGGCAAA CCTTCGATCT TCTGATCCTC GAATGGAACC CGCCGGACAT GCGCGGCCTC
GAGCTCGTGA AGACCGCGCG CAACGAGCTG CGAAGCCGCG CGCCCATTCT TTTCGTGACC
ACCACGCGCG ACGAGACCGC CGTGGTCGAA GGGCTCAATG CGGGCGCCGA CGATTTCATG
GTCGCGCCGG TGCGCGCCAC CGAGCTCGAG GCCCGGGTCA ATGCGCTGCT GCGCCGGTCC
TATCCCGCGC AGCACGAGAC CGAGCTGGTG TTCGGCCCTT ATCACTTCTA TCCGCCCGCG
CGCGTCCTCA AGGTGAATGG CACGCCCGTC GAGCTGAAGA ACCGCGAATA CGCGCTCGCG
CTGTTCCTGT TCCAGAACCT CGGCCGGCTG CTGTCGCGCG AGCACCTGCA CGAGGCGGTG
TGGGGCGTTG GCACGGCGGC GCTGTCGCGG TCGCTGGACA CCCACATCTC CCGCCTGCGG
ACCAAGCTGG GCCTCGGGCC CGCGAGCGGC TTCCTGCTGC TGGCCATCTA TGGGCTGGGC
TACCGGCTCG AAGTGGTCGA CGCCAGCACG CATCCCGACA GCCTCGCGCG CTGA
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| Protein sequence | MRIAVLDHEP DQLRLIAEAM SGLGHECHSY TEGRPLLQAL RRQTFDLLIL EWNPPDMRGL
ELVKTARNEL RSRAPILFVT TTRDETAVVE GLNAGADDFM VAPVRATELE ARVNALLRRS
YPAQHETELV FGPYHFYPPA RVLKVNGTPV ELKNREYALA LFLFQNLGRL LSREHLHEAV
WGVGTAALSR SLDTHISRLR TKLGLGPASG FLLLAIYGLG YRLEVVDAST HPDSLAR
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