| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0371 |
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| Symbol | |
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| ID | 7973515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 400464 |
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| End bp | 401480 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790974 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942300 |
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| Protein GI | 239813390 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACC CGGCACAACT CGATGCGGGC CTGGCACCGC GCCCATCGGG AGGCGGCCCC
GTGAAGCCCG CCAGCAAGCT CACCAGCATG CGCGAGATGG GCCTGCTGCT GATCATTGCG
GTGCTGTGCG TGGCGATGAG CTTCGCATCG CCCTACTTCC TCACCTGGGA CAACGTGCGC
GCCATGCTGC TGTCCTTCTC GATCGAAGGC ATCGTGGTGG TGGGCATGAC CATTTTGCTG
ATCGTCGGCG GCATCGACTT GTCGGTGGGC TCGGTGGTCT GCTTCGCGAT GGTGGTCACG
GGCAAGCTGT TCCTGATGGG CGTGGACCCA TGGATCGCGA GCCTGGTGGC CATCGGTGCG
AGCGGACTGG TCGGCGCGAT GATCGGCGGC TGCGTCACGC GCATCGGGCT CAACCACTTC
ATCGCCTCGC TGGCCTTCAT GGTGATCGTG CGCGGGCTGT GCCTGGCGCT CACGCAGGGC
ACGCCGCAGT CGCTGTTCTC GCTGCCGGCG GAGTTCAAGT TCATCGGGCA GGGCACGCTG
TTCGGCGTTC CGGCCGTGAT CCTGATCTTC GTGGCGATCG TCGTGGTGAG CGACTTCGTG
CTGCGCCGCT CGACCTTGCT GCGGCGCGTG TTCTACACCG GCAGCAACGA GAAGGCCGCG
CTGTACTCGG GCATCCGCGT GGGGCGCGTG AAGTTCTGGG TCACGGTGCT GTGTTCCGCA
TCGGCGGGCC TGGCCGGCGT GATCTACACG GCGCGCTTCG GCGCGGCCAC GCCCACCTTC
GGCGTGGGCA TGGAGCTCAA CGTGATTGCC GCCGCGGTGA TCGGCGGCGC GAGTCTCAAG
GGCGGCTCCG GCACCGTGCT GGGCGCGGTG CTGGGCCTGG CGCTGCTCTC GGTGGTGACC
AGTTCGCTGA TCCTGCTCGA CGTGTCGCCC TACTGGCAGG ACGTGATCAA GGGCCTCATC
TTGCTCGCGG CCGTGACCAT CGACCACCTC CTGAACACGA GAAAGACGAC GCGATGA
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| Protein sequence | MNYPAQLDAG LAPRPSGGGP VKPASKLTSM REMGLLLIIA VLCVAMSFAS PYFLTWDNVR
AMLLSFSIEG IVVVGMTILL IVGGIDLSVG SVVCFAMVVT GKLFLMGVDP WIASLVAIGA
SGLVGAMIGG CVTRIGLNHF IASLAFMVIV RGLCLALTQG TPQSLFSLPA EFKFIGQGTL
FGVPAVILIF VAIVVVSDFV LRRSTLLRRV FYTGSNEKAA LYSGIRVGRV KFWVTVLCSA
SAGLAGVIYT ARFGAATPTF GVGMELNVIA AAVIGGASLK GGSGTVLGAV LGLALLSVVT
SSLILLDVSP YWQDVIKGLI LLAAVTIDHL LNTRKTTR
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