Gene Vapar_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0370 
Symbol 
ID7973514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp399481 
End bp400467 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content69% 
IMG OID644790973 
Productaldo/keto reductase 
Protein accessionYP_002942299 
Protein GI239813389 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGA AGAAGACCAC GCTGGGCCCC TCGGGCATCG AATGCTCGGC CATTGGCCTG 
GGCACCTGGG CGATGGGCGG ATGGATGTGG GGCGGCGGCG ACAACGCGGC GGCCGAGGCG
GCGATCCAGG CCTCGCTGGA TGCGGGCGTG ACCCTGATCG ACACCGCGCC GGCCTACGGC
CTGGGGCGCT CCGAAAGCAT CGTGGGCACC GCGCTCAAGG GGCGCCGCCA CGAGGCCGTG
ATCGCCACCA AGTGCGGGCT GGTGTGGCAC ACGCAGAAGG GCACGCACTT CTTCGAGGAA
GACGGACATC CCGTGTACCG CTACCTCGGC CGCGAATCGA TCTTCCATGA ATGCGAAGAG
AGCCTGAAGC GCCTGCAGAC CGACTACATC GATCTCTACA TCACGCACTG GCAGGACAGC
ACCACGCCCG TGGCCGAGAC CATGGATGCG CTGCTCGCGC TCAAGAAAGA GGGAAAGATC
CGCGCCATCG GCGTGAGCAA CGTGAGCCCC GAGACGCTCG CCGAATACCT GCGCCACGGC
CCGGTCGATG CGGCGCAGGA GCGCTACAGC CTGATCGACC GCGAGATCGA GCAGACGCTC
GCGCCCCTGT GCAGCGAGCA CAACGTGGCG GTGCTCGGCT ATTCGTCGCT GGCGCTCGGC
CTGCTCGCGG GGCCCATCGA TCCGGCACGC GAGTTCAAGG GCGACGACCA GCGCGCAAGC
AATCCGCGCT TCAGCGAAGC CAACCGTTCC AGGCTCAAGG CCTTCTTCGA GGCGCTCGAG
CCGCTTCGCG AACAGCTGGG CTGCTCCTTC GGCCAGATGA TGATCGCGTG GACCGTCGCG
CGCGGCACCG TGGCTGTCGC GCTGTGCGGC GCACGCGTGC GCCAGCAGGC CATCGAGAAC
GCCGGCGCCG GTGCGGTCGC GCTGGGCGGC GACGCGCTGC GGCTGATCGA TGCCGCGGCC
AAGCGCCACC TGGGCGCGCT CGCCTGA
 
Protein sequence
MKMKKTTLGP SGIECSAIGL GTWAMGGWMW GGGDNAAAEA AIQASLDAGV TLIDTAPAYG 
LGRSESIVGT ALKGRRHEAV IATKCGLVWH TQKGTHFFEE DGHPVYRYLG RESIFHECEE
SLKRLQTDYI DLYITHWQDS TTPVAETMDA LLALKKEGKI RAIGVSNVSP ETLAEYLRHG
PVDAAQERYS LIDREIEQTL APLCSEHNVA VLGYSSLALG LLAGPIDPAR EFKGDDQRAS
NPRFSEANRS RLKAFFEALE PLREQLGCSF GQMMIAWTVA RGTVAVALCG ARVRQQAIEN
AGAGAVALGG DALRLIDAAA KRHLGALA