| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0328 |
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| Symbol | |
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| ID | 7973472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 351239 |
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| End bp | 352009 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790931 |
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| Product | putative integral membrane sensor protein |
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| Protein accession | YP_002942257 |
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| Protein GI | 239813347 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCCC TCGTCGTTGG CCAATTGCTG TCGCCCGAGT ATTCGCTGGG GCTGGTGGCG
CTCTCGTTCC TCATCTCGTT CGCGGGCTCC CTGGTGGCGC TGATCTGCGC GGGGCGCATG
GTCGGCGCCG ACGGCAAACC CAACCTCGCG GTCGTCGCGT GCGCCGCAGT GGCGCTGGGC
GGCATCGGCA TCTGGTCGAT GCACTTCATC GGCATGCTGG CGTACCGCCT GCCGGTGGGC
ATTTCGTACA ACGTGCCGCT GACGGTCGTC TCGCTGGTGG CGGCCATCCT GATCTCGGGC
ATTGCGCTGT ACATGGCGGG CGGGCGGCGC AAGTTCAGCC GGGCCGGCTG GCTGGCCGGA
AGCCTGCTCG CGGGGCTGGG CGTGTGCGTG ATGCACTACA TGGGCATGTT CGCAATGAAC
ATGCGCGCCT CGATGGACTT CGACCCCACC GTCGTGGCGC TGTCGGTGGC CATTGCCATC
ACCGCGGCGG GCGCAGCCCT GTGGCTGGCC TTCAACCTGC GCCGGCTGAG CCACCAGATT
GCGGCAGCCG CCGTGATGGG CGTGGCCGTC TGCACCATGC ACTACGTGGG CATGAGCGCG
GCCAGCATGA TCTGCATCGC GGCCGCGCCC ACCGACGCGC TGGCCATCGG CGGCAACTAC
ATGGGCCTGT CGGTGTTCGG CACGGCCGGC GCGGTGCTGA TCTTCATCTA CTGGGTGATC
ACAGGCAGCA GCCTGGACGC GCCCACCGCA CAGCGCGCCC GCACCAGCTA A
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| Protein sequence | MTPLVVGQLL SPEYSLGLVA LSFLISFAGS LVALICAGRM VGADGKPNLA VVACAAVALG
GIGIWSMHFI GMLAYRLPVG ISYNVPLTVV SLVAAILISG IALYMAGGRR KFSRAGWLAG
SLLAGLGVCV MHYMGMFAMN MRASMDFDPT VVALSVAIAI TAAGAALWLA FNLRRLSHQI
AAAAVMGVAV CTMHYVGMSA ASMICIAAAP TDALAIGGNY MGLSVFGTAG AVLIFIYWVI
TGSSLDAPTA QRARTS
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