Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0303 |
Symbol | |
ID | 7972652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 324751 |
End bp | 325881 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644790906 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_002942232 |
Protein GI | 239813322 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCC GCAGGACATT GCGCACCGAC GTCGCGATCG TCGGCGGCGG CATCGTCGGC GCGTCGGCCG CGCTGGCCTT GCGGCAGATG GGCATCGGCG TGGTGCTGCT GGAGCGCGAC CTGTGCGGCT CGCGTTCGAG CGGCGTGAAC TACGGCGGCG TGCGCCGCCA GGGCCGGCCG ATCGACCAGC TGCCGCTCGC GCAACGCGCG CACCGCATCT GGGGCCGCCT GCGCGAAACC ATCGGCACCG ACGGCGAGTA CCTGCGCTCG GGCCACTTCA AGATCGCGCG CAGCGAGGCC GACATGGCAT CGCTGGAACG CTACCGTGCG CAAAGCAGCG ACTTCGACCT GGGGCTGGAG CTGATCTCCG ATGCCCGCCT GCGCGAGCGC TGCCCCTGGC TCGGCACGCG CGCCGTCGGC GGCTCGCTGT GCGCGGAAGA CGGGCAGGCC AATCCGCGGC TGGTGTCGCC GGCCTTCGCG CTCGCGGCGC AGCGTGCGGG CGCGCAGGTC TTCGAGCGCC ACAAGGTCGA CGAGGTGGCG CACGACGGCC AGGCCTTCAT GCTGCGCTCG GGCAATGCGC TCGAAGTGCA TGCGCCGGCG CTGCTCAACT GCGCGGGCGC CTGGGCCGGA TCGATCGCCA CCGAGTTCGG CGAAGAGGTG CCGCTGCAAT CGGGCCATCC CGCGATGGCG GTGACGGAGC CGCTGCCCTT CTTCATGGAC TGGAGCCTTG GCGTGGAGGG CGGCGGCATC TACTGCCGCC AGGTGGCGCG CGGCAACCTC GTGCTGGGCG GCGGCGGCAA GGGCGTGGCG CTCGATGCCG ACCGCGCCCG CTCCGACCGC GACGCCATCG CCTCGCTTTC CGCACAGGCC GTCGAGCTGC TGCCCGCGCT GCGCCATGCG CATTTCATCC GCACCTGGAG CGGCACCGAA GGCTACCTGC CCGACCGCCA GCCGGTGCTC GGCCCGAGCC GCACCACGCC CGGCCTGTTC CATGGCTTCG GCTTTTCGGG CGCGGGCTTC CAGATCGGCC CCGCTGCCGG CGAAGTGCTG GCCGAACTCG TGCGCGACGG CCGCAGCAGC ACGCCCATCG AGAGCTTCTC GATCGAACGC TTCACCCCCA CCCCACCCTG A
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Protein sequence | MSGRRTLRTD VAIVGGGIVG ASAALALRQM GIGVVLLERD LCGSRSSGVN YGGVRRQGRP IDQLPLAQRA HRIWGRLRET IGTDGEYLRS GHFKIARSEA DMASLERYRA QSSDFDLGLE LISDARLRER CPWLGTRAVG GSLCAEDGQA NPRLVSPAFA LAAQRAGAQV FERHKVDEVA HDGQAFMLRS GNALEVHAPA LLNCAGAWAG SIATEFGEEV PLQSGHPAMA VTEPLPFFMD WSLGVEGGGI YCRQVARGNL VLGGGGKGVA LDADRARSDR DAIASLSAQA VELLPALRHA HFIRTWSGTE GYLPDRQPVL GPSRTTPGLF HGFGFSGAGF QIGPAAGEVL AELVRDGRSS TPIESFSIER FTPTPP
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