| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0284 |
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| Symbol | |
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| ID | 7972633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 304703 |
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| End bp | 305683 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790887 |
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| Product | rod shape-determining protein MreC |
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| Protein accession | YP_002942213 |
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| Protein GI | 239813303 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1792] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.259337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTGG GCACGCTCGA TCGCACAGCC CCACCCCTGT TCAACCAGGG GCAGTCGGCG
CTCAGCAAGC TGATCTTCTT CGGCGCGCTC TCGCTGTTCC TGATGGTGGC CGATGCGCGC
TTCCACCTCG TGCAGCCGCT GCGCGCGGCC GTCGGCGCGG TGCTCTACCC GGTGCAGTGG
CTGGCGCTCA AGCCGGTGCA GATGATGATG GGCGGCAGCC GCTATTTCGA AGACCTGCAG
ACGGCCCAGC GCAACGAGGA CGAGGCGCGC AAGGCGCTCA TGCTGCAGGC CGAGCGCGCG
AGCCAGGCCG ACACGCTCGC GCAGGACAAC GCGCGGCTGC GCGCGCTGCT CGAACTGCGC
CAGACCACCC AGGCGCCGGG CCGCGCGGCC GAGGTGCTGT ACGACGCGGC CGACCCCTAC
ACGCGCAAGA TCGTCATCGA CCAGGGCCTC ACGCAGGGCG TGGCGCCCGG CTCGCCCGTG
ATCGACGCGC ACGGCGTGCT GGGACAGGTG ACGCAGGTGC AGCCCTTCAC GAGCGAGGTC
ACGCTGGTGA TCGACCGCGA TCTTTCCATT CCCGTGCAGA ACACCCGCAC CGGCGTGCGC
AGCGTGGCCT TCGGCGACGC GTCGGCGCAT GGCGGCGGGC TGGAACTGCG CTTCATGGCC
GCCAATGCCG ACCTGCAGGA GGGCGACCTG CTGTCCACCA GCGGCGTCGA CGGCGTCTAT
CCGCCCGGCC TGCCGGTGGC GAAGATCGAG CGCATCGAGC GCCGCGCCGA TTCGGCCTTT
GCGCGCATCT ACTGCGTGCC GCTGGCCCGC GTGACGGCCG CGCGCTACGT GCTGGTGCTC
GCGCCCACCG GCGCTCCCTC GGCGCCGCCG GCCCCGGCGC CCGCCGCCGC GGTGCGCAAG
AAGCCGGAAG CCAAGCCGGC CGCCAAGGCG GACAAGGCCA CCGACAAGGC CGACAAGAAA
GCCGCGGAGC GCGCCCGATG A
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| Protein sequence | MPLGTLDRTA PPLFNQGQSA LSKLIFFGAL SLFLMVADAR FHLVQPLRAA VGAVLYPVQW
LALKPVQMMM GGSRYFEDLQ TAQRNEDEAR KALMLQAERA SQADTLAQDN ARLRALLELR
QTTQAPGRAA EVLYDAADPY TRKIVIDQGL TQGVAPGSPV IDAHGVLGQV TQVQPFTSEV
TLVIDRDLSI PVQNTRTGVR SVAFGDASAH GGGLELRFMA ANADLQEGDL LSTSGVDGVY
PPGLPVAKIE RIERRADSAF ARIYCVPLAR VTAARYVLVL APTGAPSAPP APAPAAAVRK
KPEAKPAAKA DKATDKADKK AAERAR
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