| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0276 |
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| Symbol | |
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| ID | 7972625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 297104 |
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| End bp | 297868 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790879 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002942205 |
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| Protein GI | 239813295 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0241099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGA CTACCATTCC CCACGTGCCT ACCGCCCGAC CCCGCTCCGC TTCGCCCGCC
CCCGCTTCCG ACGCCACCGT TTTCCGCACG CGGGCCGACG AGGTCTACGC GCAGCTCAAG
CGCGACGTGG CCGATTTCAT CCTCGTGCCC GGCGACCGCT TCACCGAGAA CGAGATCAGC
GACCGGCTCG GCGTCTCGCG CACGCCGGTG CGGCAGGCGC TGTTCCGCCT GCAGCAGGAA
GGCTTCGTCG AGGTGCTGTT CCGCAGCGGC TGGCGCGTGC TGCCCTTCGA TTTCGACCAG
TTCGAGCAGC TCTACGATCT GCGCATGGTG CTCGAGACCA CCGCGGTGCA CCGCCTCTGC
GAAGCCGACC GCCGCGTCGA CCGCAGCCTG CTCGACGCGC TGGCCGAGAT CTGGCTCGTG
CCCGCGGCCC AGCGCAGCAG CGACACCGCG CAGGTGGCGC AGTGGGACGA GGCCTTCCAC
TGCGCGCTGG TGGCCGCGGC GGGCAACGCC GAGATGGCGC GCGTGCACCG CGACGTGACG
GACCGCATCC GCATCATCCG CCGGCTCGAC TTCACCCAGC AGCCGCGCAT CGACGCCACG
TATGAAGAGC ACGCCAAGAT CTTGAAGGCC GTGCGCGCCA ACCGAGGCGA GCAGGCCGCG
ATGCTGCTGC GCGCGCACAT CGAGACCAGC CAGGCCGAGG TGCGCAAGAT CACGCTGCAC
CAGGTGCACC TCGCGCGGCA CGCGGGCAAG GCGGCGCCGC GCTGA
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| Protein sequence | MTATTIPHVP TARPRSASPA PASDATVFRT RADEVYAQLK RDVADFILVP GDRFTENEIS
DRLGVSRTPV RQALFRLQQE GFVEVLFRSG WRVLPFDFDQ FEQLYDLRMV LETTAVHRLC
EADRRVDRSL LDALAEIWLV PAAQRSSDTA QVAQWDEAFH CALVAAAGNA EMARVHRDVT
DRIRIIRRLD FTQQPRIDAT YEEHAKILKA VRANRGEQAA MLLRAHIETS QAEVRKITLH
QVHLARHAGK AAPR
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