| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0275 |
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| Symbol | |
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| ID | 7972624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 296436 |
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| End bp | 297107 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790878 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_002942204 |
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| Protein GI | 239813294 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0199791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATAG AAACTGCCAA CCCCTTTCCC TACGACTTCG AGCTGAAGAA CACCGCGCTG
GTCCTCATCG ACATGCAGCG CGACTTCATC GAGCCCGGCG GCTTCGGCGA AACGCTGGGC
AACGATGTGT CTTTGCTCGA AGCGATCGTT CCGGCCACAA AGGCGGCGCT GCAGGCATGG
CGGGAGGCCG GCGGCCTCGT GGTGCACACG CGCGAGGCGC ACAAGGCGGA TCTTTCCGAC
TGCCCGCCCG CCAAGCGCAA CCGCGGCAAC CCGAGCCTGC GCATCGGCGA CCAAGGGCCG
ATGGGCCGCA TCCTCGTCGC CGGCGAACCG GGCAACCAGA TCATCGATGC GCTGGCGCCC
GTCGATGGCG AGATGGTCAT CGACAAGCCC GGCAAGGGCG CGTTCCATGC CACCGGCCTG
CATGAGCTGC TGCAAGCGCG CGGCATCACG CACCTGCTGT TCGGCGGCGT CACCACCGAG
GTCTGCGTGC AGACCAGCAT GCGCGAGGCC AACGACCGCG GCTACGACAG CCTGCTGCTC
GAAGACTGCA CCGAGAGCTA CTTTCCGGCC TTCAAGGCGG CCACGCTCGA CATGGTCCGT
GCGCAGGGCG CGATCGTGGG CTGGACCGCG CCGAGCAGCG CGCTGCGGGC GGTGCTCGGC
CAAGGGCAAT GA
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| Protein sequence | MRIETANPFP YDFELKNTAL VLIDMQRDFI EPGGFGETLG NDVSLLEAIV PATKAALQAW
REAGGLVVHT REAHKADLSD CPPAKRNRGN PSLRIGDQGP MGRILVAGEP GNQIIDALAP
VDGEMVIDKP GKGAFHATGL HELLQARGIT HLLFGGVTTE VCVQTSMREA NDRGYDSLLL
EDCTESYFPA FKAATLDMVR AQGAIVGWTA PSSALRAVLG QGQ
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