Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0258 |
Symbol | |
ID | 7972607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 277457 |
End bp | 278653 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644790861 |
Product | histidine kinase |
Protein accession | YP_002942187 |
Protein GI | 239813277 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGCA GCCTCTACTC CCGCCACCTC TACGTGCGCA TCTGGCTCGC GGTGGTGGGC GGCGTCGTCA TCCTCACGCT GATGGCCAAC TGGATCGTGC GCGAGGCGGC CCAGGCCGAG CGCGAACGGC TGGCGCCGGT GCCGCGCAAC GTGGTGGTGC TCGATGCGCA GGACACGCCG ATCGGCACCG GCAAGGCGCT GCGCGTGCCG GGCCAGGGCC TGGAGTTCGA CGTGACGCTC AGCGACGGCA AGGCACTCAC GCTGCGCGTG GCGCCGCGCG ACCGGCCGCC CGGCGGCGGA TTCGCGCCCT GGCGCACGCC GTTCGGCCTG GGCTGGATGA TCGCGCTCGT GGGCATTGCG GTGGCGCTGG GCGTGTACCC GATCGTGCGG CGGCTCACCC AGCGGCTGGA GGCGCTGCAG CGCGGCGTGC AGCGCTGGGG CGAAGGCGAT CTCTCGGTGC GAGTGACCGA AGAAGGGCAG GACGAAGTGG CTGATCTCTC CAAACGTTTC AACGCGTCGG CCGAACGCAT CGAACAGCTG GTGCGTTCGC ACAAGTCGCT CCTGGCCAAT GCATCGCACG AGCTGCGCTC GCCGCTCACC CGCATCCGCA TGGGCCTGGA GCTGATGGGC GAACGCCCGA GCCCCAAGGC GCGCGAGGAA ATCTCGCGCA ACATCGGCGA GCTCGACCAG CTCATCGATG AGATCCTGCT GGCCAGCCGG CTCGACGCGA GCGAGGCCGA CCTGGGCACC ATCGAGGCCG TCGACCTCAC GGGGCTCGCG GCCGAGGAGT GCTCGCAGGT GAATGCCGAG CTCGACCTGG TCGAAGGCAC CGACAACGCC GGGCTCACCG TGCCCGGCGT CTCGCGCCTG CTGCGCCGCG CGATCCGCAA CCTGCTCGAG AACGCGCGCC GCTACGGCGC CGGCGAGATC AGGGTGGAGC TCGGCAGCGC CAACGGCTTT GCCACCGTGC GCGTCACCGA CCGCGGCCCG GGCGTGCCGC CGGCCCTGCG CGAACGCATC TTCGAGCCCT TCTACCGGCT GCCCGGCGCC AGCGAGCGCA ACGGCGGCGT GGGCCTGGGG CTCGCACTGG TGAAGTCGAT CGCCGAGCGG CACGGCGGCA GCGTGCGCTG CGAAGACGGC CCGGGCGGCG GCGCGAGCTT CGTGATCCGC CTGCCGGCGA GCGCGCCCGC GAACTGA
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Protein sequence | MLRSLYSRHL YVRIWLAVVG GVVILTLMAN WIVREAAQAE RERLAPVPRN VVVLDAQDTP IGTGKALRVP GQGLEFDVTL SDGKALTLRV APRDRPPGGG FAPWRTPFGL GWMIALVGIA VALGVYPIVR RLTQRLEALQ RGVQRWGEGD LSVRVTEEGQ DEVADLSKRF NASAERIEQL VRSHKSLLAN ASHELRSPLT RIRMGLELMG ERPSPKAREE ISRNIGELDQ LIDEILLASR LDASEADLGT IEAVDLTGLA AEECSQVNAE LDLVEGTDNA GLTVPGVSRL LRRAIRNLLE NARRYGAGEI RVELGSANGF ATVRVTDRGP GVPPALRERI FEPFYRLPGA SERNGGVGLG LALVKSIAER HGGSVRCEDG PGGGASFVIR LPASAPAN
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