Gene Vapar_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0180 
Symbol 
ID7971389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp184856 
End bp185497 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID644790783 
Productprotein of unknown function DUF1185 
Protein accessionYP_002942109 
Protein GI239813199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATA TACGCCGCGT CTTCACCCAT GTCGAGCACA TCCACCACGA GTTCGGCCCG 
CGCGCCGCAA CGCCGCTGGT GCGCGGTGCC ATCGGCGCGG TGCTGGCCAA TCCCTTCGCG 
GGCCGCTACG AGCCCGACAT CCTGCCGATG ATGGCGCTGC TCGACCCGGT GGGCGTCGAC 
ATGGCGCACA GGCTGCACGC CGCCATGGAC GTGCCGCTCG AGCAGATCGC CACCTACGGC 
AAGGGCGCCA TCGTCGGCGC CGCCGGCGAG CTCGAGCACG GCGCGCTCTG GCATGTGCCC 
GGTGGCTATG CCATGCGCGA GCTGCTCGGC TGGAAGGGCG ACCGCGCGGC CTACACCGCG 
GGCAAGGCGG AAGAGAAGAC CGGCCAGCCC GGCAATGCGC TGTCCATCGT GCCCTCGACC 
AAGAAGGTCG GCCCGCCCGG CGCCGCGCTC GACGTGCCGC TCACCAACAT CAACGCCAGC 
TACGTGCGCG GCCAGTTCGA CGCCATCGAG GTGCGCGTGC CCGGCGCGCC GGCCGCCGAC 
GAGATCGTCT TCATCCTCGC GATGAGCACC GGCTACCGCG TGCATGCACG CGTGGGCGGC 
CTGCTCGCCA AGGACATCAG CAAATGGGAC GGCCTGCGCT GA
 
Protein sequence
MIDIRRVFTH VEHIHHEFGP RAATPLVRGA IGAVLANPFA GRYEPDILPM MALLDPVGVD 
MAHRLHAAMD VPLEQIATYG KGAIVGAAGE LEHGALWHVP GGYAMRELLG WKGDRAAYTA 
GKAEEKTGQP GNALSIVPST KKVGPPGAAL DVPLTNINAS YVRGQFDAIE VRVPGAPAAD 
EIVFILAMST GYRVHARVGG LLAKDISKWD GLR