| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0179 |
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| Symbol | |
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| ID | 7971388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 183917 |
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| End bp | 184834 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790782 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942108 |
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| Protein GI | 239813198 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2122] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC AACGCACCGC GCTCGACGCG AGCCGCTGGC ACTTCAACCA TGGCCCGATC
GACATCGTGG CCGAGGCGCA TGGCGATCCG TACGCCGTTG CGGCCGCGCA CGACGCGGCC
TGGGCGCGCT TCGGCCATGT GCTGGACGAG CTGGTGCGCG AGCTGCCGCT GCTGCGCCTG
TCGGTGACCG ACAGCATGCG GCCGCGCGGC GTGGTCGGTG CGCGCATGTG GGATGCCTGC
GCGGCGTTCT CGCCGATGTT CATCACGCCG ATGGCGGCGG TGGCCGGCTC GGTGGCGCAG
GAGCTTATCG CGTTCTACGA CCGCCCCGGC ATCGAGCGCG CCTGGATCAA CAACGGCGGC
GACATCGCGC TGCACCTTGC GCCGGGCCAG TCGGCGCGCG TGGGTGTCTA TGCCGATCTC
GCACGCTTCG ACTGGCGCAA ACATGTGGAG GGTGAAAGCG GCATCCTCAC CACCGACGGC
CAGTTCGAAA TCAGCGCCGC ACAGCCGGTG CGCGGCGTGG CCACCAGTGG CTGGCGCGGG
CGCAGCTTCT CGCTGGGCAT TGCCGACAGC GTGACGGTCC TGGCCGCCAC CGCGGCCGAG
GCCGATGCAG CCGCCACCGT GATTGCCAAC GCCGTCGACG TGGACGATGC CGCCATCCGC
CGGCGCCCCG CCAGCGAATG CAAGGACGAT AGCGACCTGG GCGAGATGCT CGTCACGGTC
GACGTGCCGC CGCTTTCGCC TGCGCAGGTG AAGAGCGCGC TCGACACCGG CGCCGTGTGC
GCCAAGGTGC TGCAAAAAGA AGGGCTCGCC TGGGCCGCTC TGCTCGTTTG CCAGGGGCAG
TGGCGACTTG TCGAACCCTT ATGCTCGAAG TCGCTGGCCA GCGCGCCGGC CGATGCAGTT
GGTTCAGTAT TTGCTTAA
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| Protein sequence | MTAQRTALDA SRWHFNHGPI DIVAEAHGDP YAVAAAHDAA WARFGHVLDE LVRELPLLRL
SVTDSMRPRG VVGARMWDAC AAFSPMFITP MAAVAGSVAQ ELIAFYDRPG IERAWINNGG
DIALHLAPGQ SARVGVYADL ARFDWRKHVE GESGILTTDG QFEISAAQPV RGVATSGWRG
RSFSLGIADS VTVLAATAAE ADAAATVIAN AVDVDDAAIR RRPASECKDD SDLGEMLVTV
DVPPLSPAQV KSALDTGAVC AKVLQKEGLA WAALLVCQGQ WRLVEPLCSK SLASAPADAV
GSVFA
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