| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0175 |
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| Symbol | |
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| ID | 7971384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 179022 |
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| End bp | 180221 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790778 |
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| Product | amidohydrolase |
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| Protein accession | YP_002942104 |
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| Protein GI | 239813194 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAA TCGCAGCCGG CGCAAAGTCG GGCAAGGTCG TCATCAAGAA CATAGGGCTG
CTGCTCTCGG GCGACATCGA CAAGCCCATC CTGGACGCCG ACACCATCGT GGTGAACGAC
GGCCTGATCG TGGCGGTCGG CAAGGAAAAG GACTGCGACC TCGACGGCGC GCAGACCGTC
ATCGACGCGA AGAAGACCTG CGTCGCGCCC GGCCTGATCG ACAGCCACGT GCACCCGGTG
TTCGGCGACT GGACGCCGCG CCAGGGGCAG ATCGGCTGGA TCGACTCCAC CATGCACGGC
GGCGTCACCA CCATGATCTC GGCCGGCGAG GTGCACCTGC CCGGCCGGCC CAAGGACATC
GTGGGCCTGA AGGCGCTGGC CATCACCGCG CAGCGCGCCT TCGACAACTT CCGCCCCGGC
GGCGTGAAGG TGCTGGCCGG CGCGCCGGTG ATCGAGAAGG GCATGGTCGA GAGCGACTTC
AAGGAACTGG CCGAAGCCGG CGTGGGCCTG CTCGGCGAAG TGGGCCTGGG CTCGGTCAAG
GCCGGCTACG AGGCCAAGGA GATGGTGGCC TGGGCGCGCA AGTACGGCAT CCAGAGCACG
ATCCACACGG GCGGCCCGTC GATCCCGGGC TCGGGCCTGA TCGACAAGGA CGTGGTGCTG
GAGGCCGACG CCGACATCAT CGGCCACATC AACGGCGGCC ACACCTCGCT GCCCGAGGCG
CATGTGTGCG AGCTGTGCGA GAAGAGCTCG CGCGCGATCG AGATCGTGCA CAACGGCAAC
GAGAAGGTGG CCATTGCCGC GGCCAAGGCC GCGCTCGAGC TCAAGTGCCC GCACCGCGTG
ATCCTCGGCA CCGACGGGCC CGCGGGCTCG GGCGTGCAGC CGCTGGGCAT CCTGCGCATG
GTGGCCATGC TGTCGTCGAT TGCAAACATC CCGGCCGAGC TGGTGTTCTG CTTTGCCACC
GGCAACACGG CGAAGATCCG CAAGCTCAAC TGCGGGCTGG TCGAAGTGGG CCGCGACGCC
GACTTCGTCT TCATGGACCG CGCGCAGCAC TCGCCCGCGC CGGGCCTGCT CGAGAGCGTG
CAGCTCGGCG ACATCCCGGG CGTGGGCATG GTGATGATCG ACGGCATCGT GCGCTGCGGC
CGCAGCCGCA ACACGCCGCC CGCGACCGAG ATCCCGGTGG TGCTGCCGGC GGCGCACTGA
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| Protein sequence | MAEIAAGAKS GKVVIKNIGL LLSGDIDKPI LDADTIVVND GLIVAVGKEK DCDLDGAQTV
IDAKKTCVAP GLIDSHVHPV FGDWTPRQGQ IGWIDSTMHG GVTTMISAGE VHLPGRPKDI
VGLKALAITA QRAFDNFRPG GVKVLAGAPV IEKGMVESDF KELAEAGVGL LGEVGLGSVK
AGYEAKEMVA WARKYGIQST IHTGGPSIPG SGLIDKDVVL EADADIIGHI NGGHTSLPEA
HVCELCEKSS RAIEIVHNGN EKVAIAAAKA ALELKCPHRV ILGTDGPAGS GVQPLGILRM
VAMLSSIANI PAELVFCFAT GNTAKIRKLN CGLVEVGRDA DFVFMDRAQH SPAPGLLESV
QLGDIPGVGM VMIDGIVRCG RSRNTPPATE IPVVLPAAH
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