| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0174 |
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| Symbol | |
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| ID | 7971383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 178602 |
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| End bp | 179009 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790777 |
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| Product | GtrA family protein |
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| Protein accession | YP_002942103 |
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| Protein GI | 239813193 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2246] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCCG GCCGCGAGTT CCTGGCGTTT GCGGTGGTCG GGGTCATCGG GCTGGTGGTC
GACGTGGCCG TGCTGTACCT TGCGGCGCCG CTTTTGGGCT GGTACGGCGC GCGCGTGCTG
TCCTTCCTGG CGGCCGCCAC CACCACCTGG GCGCTGAACC GGCGCTACAC CTTCGCGGCG
CGGCGCGCCC TGGGCGCGGC AACGCCGATC GTGCGCGAGT ACCTCGGCTA TCTCGCCACC
ATGCTGGGCG GCGCGGTCGT CAACTACGGC GCCTATGTGC TGGTGCTGCA CTGGCTCGAA
GGCCCGTGGG TGCCCGCACT CGGCGTCGCG GCCGGCAGCT GCGCGGGAAT GGCGGTCAAC
TTCCTGGCCG CGCGGCACCT CGTCTTCAAG CCGCGGCGCA GCCCCTGA
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| Protein sequence | MKAGREFLAF AVVGVIGLVV DVAVLYLAAP LLGWYGARVL SFLAAATTTW ALNRRYTFAA
RRALGAATPI VREYLGYLAT MLGGAVVNYG AYVLVLHWLE GPWVPALGVA AGSCAGMAVN
FLAARHLVFK PRRSP
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