| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0168 |
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| Symbol | |
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| ID | 7971377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 170553 |
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| End bp | 171347 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644790771 |
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| Product | SH3 type 3 domain protein |
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| Protein accession | YP_002942097 |
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| Protein GI | 239813187 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4991] Uncharacterized protein with a bacterial SH3 domain homologue |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA AACTCTCCAT GCGCTGGATC GGCATCGGCG CCGTTGCGCT CGCCTTGCCG
ATGGCCGCCG CGGCGCAGCA GGCCTTCACG CGCGGCGCGG TCAACCTGCG GGCCGGGCCC
TCGGGCGACT ATCCGCTGGT GGCGCGGCTC GGCCCGGGCC AGCCGCTCGA CGTGATCGGC
TGTACCGGCG GCTACAGCTG GTGCGACGTG GTGCTGCCCG ACGGCGGGCG CGGCTGGGTC
TGGGCCCGGA GCCTGGACTA CGCCTACCAG GAGCGGCGCG TGCCGCTGGC CAGCTACGCC
GCGGTGATTG GCGTGCCCGT CGTCACCTTC GTGATCGGCA GCTACTGGGC CGACTACTAC
CGCGACCGGC CCTGGTACGG CGAGCGCCGC TGGTGGGGCG GCCGGCCGCC GCCGCCGCCG
ATGCCCGGCT GGCGTCCCCC GCCGCCGGTG CGGCCGGCCT GGCAGCCGAG GCCGTGGCCG
GGCCCGGGGT TCAAGCCCGC GCCGGGGCCC GGCTTCCATC CGCAACCGGG ACCGGGCTAC
CGCCCGCCAC GGCCGGGGCC GGGCTATCGC CCGCCGGCCG ACCCGGGCAT CAAGCCGCCG
CGGCCCCAGC CGGCCTTCCG GCCCGGACCG CCGCCCGGCC AGCCGCAGAT GCATCCGGGC
GGTGGCCGGC CCGGCGCCGG TGGCGGAGGC GGCGGGCGCC CGCATGGCGG CGGTGAAGGC
GGCGGCAGGG GCGGCGGCCA CGGCCATGGT GGCGGTGGTG GTGGAAAGGG CGGTGGTCAC
GGCCACCGCG ACTGA
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| Protein sequence | MNNKLSMRWI GIGAVALALP MAAAAQQAFT RGAVNLRAGP SGDYPLVARL GPGQPLDVIG
CTGGYSWCDV VLPDGGRGWV WARSLDYAYQ ERRVPLASYA AVIGVPVVTF VIGSYWADYY
RDRPWYGERR WWGGRPPPPP MPGWRPPPPV RPAWQPRPWP GPGFKPAPGP GFHPQPGPGY
RPPRPGPGYR PPADPGIKPP RPQPAFRPGP PPGQPQMHPG GGRPGAGGGG GGRPHGGGEG
GGRGGGHGHG GGGGGKGGGH GHRD
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