| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0160 |
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| Symbol | |
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| ID | 7971696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 162998 |
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| End bp | 163732 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790763 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002942089 |
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| Protein GI | 239813179 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.631102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCCA TGCCCGAAGC TTCCGCCCAC AACGACCGCG CGCTGCGCGT GCTGTCGGTG
CTGGCGCAGA GCAAGTCGGC GATGAGTGCG GCCGAACTCG CCGAAGCCAC GGGCCTCGTC
AAGAGCACGC TGTACCGGCA GATCGCGGTG CTGCGGCGCT GGGGCTTCGT GATGGAGACC
GACGGACGCT ATTCGCCCGG CCCCGTGAGC GTGCAGCTCG CGAGCGGCTT CGACGGCAAC
TCCGACCTCG TCATGGCCGC GCGCGCCGAC ATGCGCGCGC TCGCGCAGCA AAGCCATGAA
AGCGTGGCGC TGGTCACGCT GGTCAACGAC CGCGTCGTGT GCCTGGAAAT GATCGACAGC
GAGCAGTCGC TGCGCTGCTC GTTCGACCGC GGCCGCAGCG TGCCGGCGCG CGACGGCGCC
AGCGCCAAAT GCCTGCTGGC CCACCTGCCG GCCGACCAGC GCGATGCCTT GCTCGACAGC
CTTGGCGACG ACCCCGGCCG CCGCGCCGAG CGTGCCGCCG AGCTCGACGC GATCCGCGAG
GCCGGCCATG CCGTGACCCA CGGCGAGGTC GACGCGGGCG TCTGGGGCGC GAGCGCACCG
GTGCTCGGCC CGGGCCGGCG CCTGCGCGGC GCGATCACGC TCATGGCGCC GCTCACGCGC
GCCGGGGGCA TGGAAGCTGC ATGGGCCGCC CTCACCGTCG TCACCGCGGC GCGCATCTCG
CGCGCGCTGC AATAG
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| Protein sequence | MTSMPEASAH NDRALRVLSV LAQSKSAMSA AELAEATGLV KSTLYRQIAV LRRWGFVMET
DGRYSPGPVS VQLASGFDGN SDLVMAARAD MRALAQQSHE SVALVTLVND RVVCLEMIDS
EQSLRCSFDR GRSVPARDGA SAKCLLAHLP ADQRDALLDS LGDDPGRRAE RAAELDAIRE
AGHAVTHGEV DAGVWGASAP VLGPGRRLRG AITLMAPLTR AGGMEAAWAA LTVVTAARIS
RALQ
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