| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0151 |
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| Symbol | |
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| ID | 7971687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 151015 |
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| End bp | 152607 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790754 |
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| Product | peptidase S41 |
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| Protein accession | YP_002942080 |
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| Protein GI | 239813170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.624429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGG GCAATGGACA TGCGCGGGCG AGGCCGCGCT TCACCGCATC GGCTGCGGCC
GCATTCGCGT TGGCCGGTAT CGTTTGCGCG CTGGCGGGCT GTGGCGGAGG AGGAGGTGGT
GGTGGAGGGG GTGGCGGATT TCCGATCGTC GCGCCGCCCG GCACCACGCC GCCTCCTGCC
AGCGGCGGCG ACGATGACGC CATCGTCGCC TCGTCCACCG TGGCCGGCCT GTGCGCCGCG
CCGCGCCCCG GCACCAATCC CGAGACGGGA ATCGCCTACC CCGACAAGCC CGGCACGCTG
ACCGACGAGA AGCGCTGGGT ACGCGGATGG ATCGACGAAA CCTACCTCTG GTACGGCGAG
GTGCCCACCA CCCTCAAGGC CGCCGACTAC GCCACGCCGG TCGCGTACTT CAGCGTGCTC
AAGACCCCGT TGCTCACGGC CTCGGGCCGC GCGAAGGACC GCTTCCACTA CGTGTACGAC
ACCGAGCGCT ACCGGCAGCT CTCGGAGAAC GGCGTGGCGC CGGGCTACGG CATGGAGTTC
GCGTTCGTGC GCAACTCGCG CCCGCGCGAC CTGCGCATCG CGTTCACCGA GCCCGGCTCG
CCCGCGGCCA CGGCAGGCAT CGCGCGCGGC GCCAAGGTGC TCGAGGTCGA CGGCGTCGAC
GTGGTCAACG GCACCAACAC CGCCGTGATC AACCGCGGCA TCGCGCCCAC GGCCATCGGC
GAATCGCACA GCTTCAAGCT GCAGGAAGGC AGTGCGACGC GCACCGTCAC GCTGGCCGCG
GCGAGCATCA CGCGCACGCC GGTGCAGAAC GTCAAGAGCA TCGACACCGG CAGCGGCCGC
GTCGGCTACC TGCTCTTCAA CGACCACATC ACGACCTCCG AGTCGCAGCT CATCAGCGCC
TTCAACCAGT TCAGGCAGGA CGGCGTGCAG GACCTCGTGC TCGACATGCG CTACAACGGC
GGCGGCCAGC TCAACATCGC GAATCGCCTC GCCTCCATGG TGTCTTCGTC GGCCACCACC
TCGGGCAAGG TCTTCGAGCG CCTGTCCTTC AACGACAAGA ATCCGTTCCA CCTGACGCCG
GCGCAGACCA TCTATCCGTT CTACGGCACC AGCCGCACGG GCGCGACGCT GCCAAGGCTG
GGCCTCTCGC AGGTCACGGT GCTGGTCGGC CCCGACACCT GCTCGGCGAG CGAATCGGTG
GTCAACGGCC TGCGCGGCAT CGACGTCAAG GTCAACCTCG TGGGCGGCGC CACCTGCGGC
AAGCCCTACG GCTTCTCTCC GCAGGACAAC TGCGGCACCA GCTATTTCGC GATCCAGTTC
CAGGGCGTCA ACGCCAAGAA CTTCGGCGAC TACGGTGATG GCTTCGCGCC CGACTGCACC
GTGGCCGACG ATTTCGACCA CCCGCTCGGC GACCCGGCCG AGGCGCGGCT GGCGGCTGCC
CTTGCCATGC GCAGCGGCGG CGCCTGCCCC GTTTCGGCCA AGAGCGGAGC GGGGCTCGAG
AAATCCGGGA CGGCCGGCGA ACAGCCCTAC CTGCTCGACC GCACGCCGCT GCGCGAAATG
CGCCTGCTCG AAACCGCACC GTCGCCGGGC TGA
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| Protein sequence | MSLGNGHARA RPRFTASAAA AFALAGIVCA LAGCGGGGGG GGGGGGFPIV APPGTTPPPA
SGGDDDAIVA SSTVAGLCAA PRPGTNPETG IAYPDKPGTL TDEKRWVRGW IDETYLWYGE
VPTTLKAADY ATPVAYFSVL KTPLLTASGR AKDRFHYVYD TERYRQLSEN GVAPGYGMEF
AFVRNSRPRD LRIAFTEPGS PAATAGIARG AKVLEVDGVD VVNGTNTAVI NRGIAPTAIG
ESHSFKLQEG SATRTVTLAA ASITRTPVQN VKSIDTGSGR VGYLLFNDHI TTSESQLISA
FNQFRQDGVQ DLVLDMRYNG GGQLNIANRL ASMVSSSATT SGKVFERLSF NDKNPFHLTP
AQTIYPFYGT SRTGATLPRL GLSQVTVLVG PDTCSASESV VNGLRGIDVK VNLVGGATCG
KPYGFSPQDN CGTSYFAIQF QGVNAKNFGD YGDGFAPDCT VADDFDHPLG DPAEARLAAA
LAMRSGGACP VSAKSGAGLE KSGTAGEQPY LLDRTPLREM RLLETAPSPG
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