| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0134 |
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| Symbol | |
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| ID | 7971670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 133627 |
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| End bp | 134517 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790737 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942063 |
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| Protein GI | 239813153 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACAGC TCAACCTCGA CCAACTCCGC ACGCTCATCG CCATCGCCGA TCTCGGCACC
TTCTCGGCGG CGGCCAAGGC GCTGCACCTT GCGCAGCCCA CGGTGAGCCT GCACATCAGC
GAACTCGAAT CGCGCCTCGA TGCGCAGCTG GTGGTGCGCG GCAATCGCCG CGTCACGCCC
ACGGCGGCCG GCGCGGCGCT GGTCGAGCGC GGGCGCAAGC TGCTGCGCGA CACCGACGAT
GCCGTCGAGG CCGTCAAGCG CCAGGCCGAA GGCCGCACCG GCCGCGTGCG GCTCGGCACT
TCCACCGGCG TGGTGGTCGA CCTGCTGCCG CAGGTGCTCG AAGCGCTGGG CGCCCGGCAT
GCGGGCATCG ACGTGGAGGT CAGCATCCTG GGCTCGTACG AGGCAATGGC GCGGCTGGCC
GCCGGCACGC TCGACATCGG GCTGGTCGCC ATGCCGCAGC CGCCGCTGCG CGAACTGGTC
GTCACGCCCT GGTGCGACCA GGCCATGATG GCCTTCGTGC CGCAGCGCTG GAAGGCGCCC
AGGCGCGTCA CGCCGGCCTG GCTGGCCGCG CAGCCGCTGA TCTTCAACGA CGCCACCACC
CACATGTACC GGCTCTCGAT GGAGTGGTTC GCCGCGGCCG GCTTCGCGCC GCGTGCGCGC
ATCGAGCTCA ACTACGACGC CGCGATCCGC AGCCTGGTGG CGGCCGGCTA CGGCGCCGCA
CTGCTGCCGC TGCAGCAGAC CACCGATGCG GCGCTGAACG AGCGCATGCA GATCCTGCCG
ATCACGCCCA GGCTCACGCG CCGCTTGGGC ATTGCGCACC GCCAGCGCGC CCTGCTCGAT
GGCGCCACGC AAAGCGTGCT GCAGGTGCTG ACGGCCTTTC GCCAGGTCTG A
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| Protein sequence | MRQLNLDQLR TLIAIADLGT FSAAAKALHL AQPTVSLHIS ELESRLDAQL VVRGNRRVTP
TAAGAALVER GRKLLRDTDD AVEAVKRQAE GRTGRVRLGT STGVVVDLLP QVLEALGARH
AGIDVEVSIL GSYEAMARLA AGTLDIGLVA MPQPPLRELV VTPWCDQAMM AFVPQRWKAP
RRVTPAWLAA QPLIFNDATT HMYRLSMEWF AAAGFAPRAR IELNYDAAIR SLVAAGYGAA
LLPLQQTTDA ALNERMQILP ITPRLTRRLG IAHRQRALLD GATQSVLQVL TAFRQV
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