| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0124 |
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| Symbol | |
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| ID | 7971660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 123428 |
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| End bp | 125101 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790727 |
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| Product | Amidohydrolase 3 |
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| Protein accession | YP_002942053 |
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| Protein GI | 239813143 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.194416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAC TGCTCATGGC GGCCGGGGCG GCTGCACTGC TGCTGCGGCC GCCTGCCGCA
CAGGCCCAGC CGGCCGACCT GATCGTCACC AACGCGAAGA TCGCCACGCT CGACGCGGCC
GCCACCACCG CGCAGGCCCT GGCCGTGCGC GACGGCCGCA TCGTGGCGGT CGGCAATGCC
GCGCAGGTGC GCGCGCTCTC GGGCCCGATC ACGCGCACGG TGGATGCGGG CGGGCGCACC
GTGGTCCCGG GGCTCATCGA CTCGCACATG CATGCGGTGC GCGCGGCGCT GAGCTATTCG
ACCGAGGTCA ACTGGATCGG CGCCGGCAGC ATCGGCGAAG CCATGGAGCG CATCCGCGCC
GCGGCCGCGC GTGCGCGGCC CGGCGGCTGG CTGATCGTGG CGGGTGGCTG GACCGAGCAG
CAGTTCGTCG AGCGCCGCCG CCCCACCGCG GCCGAGCTGC AGGAGGCGGC ACCGAACCAT
CCGGTGTACG TGCAGCTGTT CTACGAAGCG GTGGTGATGA CGCCCAAGGC GCTCGAGGCG
CTGGGCGTTC CGGCGGGCAC GCTGCCGGCC GGCATGAAGC CCGCGGCGGA CGGTGCGCCG
GGCTGGATGA CGGGCGACAT CGTCGGCATC TCGGCCCTCT TCGACAAGCT GCCCAAGCCG
ACCTACGACG ACAACCTGGC CGGCACGCGC GCCTTTTTCC GCGAGCTGAA CCGCCTGGGC
GTCACCGGCC TGGTGGACCC GGGCGGCTTC AGCATTGCGC CGTCGCAGTA CGCGGCGCTG
TTCGAGCTGT GGCGCGAGAA GGCGCTGACG CTGCGCGTGG CCTACAGCGT GTTCGCGCAG
AAGCCCGGCG CCGAGCTGCA GGAGTTCCGA GAGCTCACGC AGATGCTGCC GATGGGCTTT
GGCGACGACA TGCTCAAGTT CAACGGCCTC GGCGAGCGCG TGACGCTCGC GATGTACAAC
AACAATTTTC CCGACGCAGC CGCGAAGGAG AAGTTCTACG AGCTCATCAA GTGGGCGGCG
ATGCGCAGGC TCGCGGTCAC CATCCACTGG CAGGAGAACG GCTCGGTCGA CCACCTGCTC
GGTCTCTACG AGAAGCTCAA CGCCGAAGTG CCGATCAAGG AGCTGCGCTG GTCGATCGCG
CACCTGGACG ACGCCTCGCC CGAGACGCTC GCGCGCATGA AGGCGCTGGG CATCGGCTGG
ACCATGCAGG ACGCGATGTA CTTCCAGGGC GACCGCGCGC TCGCCACGCG CGGCGAGGCG
GCGCGCCGCA TGCCGCCCAT CGGCAGCGCA CTGCGCACCG GCGTGAACGT GGGCGCCGGC
ACCGATGCGC ACCGCGTGGC TTCGTACAAC CCTTTTGTCG CGCTGCAATG GATGCTCGAC
GGCAGGACCG TGAGCGGCAA GGCGATGCGC GGTGCCGACG AGACGCCCAC GCGCGAACAG
GCGCTGCGGC TCTACACGGT GGGCAGCGCG TGGTTCAGCT TCGACGAGGC AAGGCGCGGC
ACGCTCGAAG TGGGCAAGCT CGCGGACTTC GCGATCCTCG ACCAGGACTT TTTCTCGGTG
CCGCTGGAGC GCATCGGCAA GACCGTGTCG CTGATGACGG TGGTGGGCGG GCGCGTGGTC
TATGCCGCGC GGCCCTTCGA TGGGGCAGGC ACCTCGGTGG CTGCGGCACC CTAG
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| Protein sequence | MRTLLMAAGA AALLLRPPAA QAQPADLIVT NAKIATLDAA ATTAQALAVR DGRIVAVGNA
AQVRALSGPI TRTVDAGGRT VVPGLIDSHM HAVRAALSYS TEVNWIGAGS IGEAMERIRA
AAARARPGGW LIVAGGWTEQ QFVERRRPTA AELQEAAPNH PVYVQLFYEA VVMTPKALEA
LGVPAGTLPA GMKPAADGAP GWMTGDIVGI SALFDKLPKP TYDDNLAGTR AFFRELNRLG
VTGLVDPGGF SIAPSQYAAL FELWREKALT LRVAYSVFAQ KPGAELQEFR ELTQMLPMGF
GDDMLKFNGL GERVTLAMYN NNFPDAAAKE KFYELIKWAA MRRLAVTIHW QENGSVDHLL
GLYEKLNAEV PIKELRWSIA HLDDASPETL ARMKALGIGW TMQDAMYFQG DRALATRGEA
ARRMPPIGSA LRTGVNVGAG TDAHRVASYN PFVALQWMLD GRTVSGKAMR GADETPTREQ
ALRLYTVGSA WFSFDEARRG TLEVGKLADF AILDQDFFSV PLERIGKTVS LMTVVGGRVV
YAARPFDGAG TSVAAAP
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