| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0101 |
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| Symbol | |
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| ID | 7971637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 100715 |
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| End bp | 101521 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644790704 |
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| Product | cyclase family protein |
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| Protein accession | YP_002942030 |
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| Protein GI | 239813120 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1878] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.956859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCA AATTCGTCGA CCTTTCGATC TTTCTCGAAA ACGATGTGCT GTCCGATCCG
CCGGCCTTCG CGCCCAAGAT CCAGTACTTC ACGCACGAGC AGACCTACGA GCAGATCGAG
CCCTTCTTTC CAGGCCTCAA GAAAGAAGAC CTGCCCGACG GCGAAGGCTG GGCCGTGGAG
CTGGTGCAGC TTTCGACGCA CAACGGCACG CACCTCGATG CGCCCTATCA CTTCCACTCC
ACCATGGACA AGGCGCTGGG CGAGAAGAAG CCCGCCATCG CGATCCACGA GGTGCCGCTC
GAATGGTGCT TCCAGCCCGG CGTGAAGCTC GACTTCCGCC ACTTTGCCGA TGGCTACGTG
GTCACGGCCG GCGACGTCGA GGCCGAGCTC AAGCGCATCG GCCACACGCT GAGCCCGCTG
GAGATCGTGG TGGTGAACAC GCGCGCGGGC TCGCGCTACG GCCACAACGA CTACGTCTCG
GCCGGCGCGG GCATGGGCTA CGAGGCCACC ATGTATTTGC TGGAGCGCGG CGTGCGCCTC
ACGGGCACCG ACGCCTGGAG CTGGGATGCG CCTTTCGTGC ACACCGCCAA GAAGTACGGC
GAGACGCACG ACGCCTCGCT GATCTGGGAA GGCCACAAGG CCGGCCGCGA CATCGGCTAC
TGCCACATCG AGAAGCTGCA CAACCTCGAG GCGCTGCCGC CCACGGGCTT TTTCATCAGC
TGCTTTCCGC ACAAGATCCG CGGCGCATCG GCCGGCTGGA CGCGCGCGGT GGCGATCTTC
GACGATGCGC TGATGGCGTC GGCCTGA
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| Protein sequence | MPRKFVDLSI FLENDVLSDP PAFAPKIQYF THEQTYEQIE PFFPGLKKED LPDGEGWAVE
LVQLSTHNGT HLDAPYHFHS TMDKALGEKK PAIAIHEVPL EWCFQPGVKL DFRHFADGYV
VTAGDVEAEL KRIGHTLSPL EIVVVNTRAG SRYGHNDYVS AGAGMGYEAT MYLLERGVRL
TGTDAWSWDA PFVHTAKKYG ETHDASLIWE GHKAGRDIGY CHIEKLHNLE ALPPTGFFIS
CFPHKIRGAS AGWTRAVAIF DDALMASA
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