Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_4160 |
Symbol | |
ID | 7858088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4589964 |
End bp | 4590653 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643868261 |
Product | ABC transporter related |
Protein accession | YP_002884161 |
Protein GI | 229822635 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA TCGTCCTGGA GACGCGGTCC GTCAGCCGCT CGTTCGGTGC GATGCCCGCC GTCGACGGCG TGGACCTCAC CGTGCGCGCC GGTGAGGTCG TCGCGGTGAT GGGACCGTCG GGGTCTGGAA AGTCGACGCT GCTTCACCTC GTCGCCGGAC TGCTCCGCCC TGACTCCGGT GAGGTGTGGT TCGACGGCAC GCGTCTGGAC AACCAGCCTG AGCACGCACG AGCGAGGACG CGCCTGCGAC ACATGGGCTT CGTCTTCCAG TTCGGCGACC TCGTACCGGA ACTCACCGTC GTCGAGAACG TCGAGCTGCC GCTCCGCCTC CTCGGCACAG CTCGCGCGAG CGCACGAGCT CGTGCGCTGG AGATGCTCGA CCGCTTCGGG ATCGCCGAGC AGGCGGACCG GCGCCTCTCC GAGGTGTCGG GCGGGCAGGC CCAGCGCGCC GCAGTCGCCC GTGCGCTCGT CCACCAGCCG GCCGTCGTGC TGGCCGATGA ACCGACCGGT TCGCTGGACA CGCTGACGGG CGAGCTCGTG CTCGAGGAGC TCGTGGGAGC TGCCGCGGAA CGTGGCACGG CCGTCGTTCT CGTGACGCAC GAGCTCCGGG TCGCGTCCTA TGCCGACCGC GACGTCCTGG TCCGGGACGG CCGCATCGTC GCGGATCCGG TCGGCGCGGT CCCGTCATGA
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Protein sequence | MAEIVLETRS VSRSFGAMPA VDGVDLTVRA GEVVAVMGPS GSGKSTLLHL VAGLLRPDSG EVWFDGTRLD NQPEHARART RLRHMGFVFQ FGDLVPELTV VENVELPLRL LGTARASARA RALEMLDRFG IAEQADRRLS EVSGGQAQRA AVARALVHQP AVVLADEPTG SLDTLTGELV LEELVGAAAE RGTAVVLVTH ELRVASYADR DVLVRDGRIV ADPVGAVPS
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