Gene Bcav_4160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4160 
Symbol 
ID7858088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4589964 
End bp4590653 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID643868261 
ProductABC transporter related 
Protein accessionYP_002884161 
Protein GI229822635 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA TCGTCCTGGA GACGCGGTCC GTCAGCCGCT CGTTCGGTGC GATGCCCGCC 
GTCGACGGCG TGGACCTCAC CGTGCGCGCC GGTGAGGTCG TCGCGGTGAT GGGACCGTCG
GGGTCTGGAA AGTCGACGCT GCTTCACCTC GTCGCCGGAC TGCTCCGCCC TGACTCCGGT
GAGGTGTGGT TCGACGGCAC GCGTCTGGAC AACCAGCCTG AGCACGCACG AGCGAGGACG
CGCCTGCGAC ACATGGGCTT CGTCTTCCAG TTCGGCGACC TCGTACCGGA ACTCACCGTC
GTCGAGAACG TCGAGCTGCC GCTCCGCCTC CTCGGCACAG CTCGCGCGAG CGCACGAGCT
CGTGCGCTGG AGATGCTCGA CCGCTTCGGG ATCGCCGAGC AGGCGGACCG GCGCCTCTCC
GAGGTGTCGG GCGGGCAGGC CCAGCGCGCC GCAGTCGCCC GTGCGCTCGT CCACCAGCCG
GCCGTCGTGC TGGCCGATGA ACCGACCGGT TCGCTGGACA CGCTGACGGG CGAGCTCGTG
CTCGAGGAGC TCGTGGGAGC TGCCGCGGAA CGTGGCACGG CCGTCGTTCT CGTGACGCAC
GAGCTCCGGG TCGCGTCCTA TGCCGACCGC GACGTCCTGG TCCGGGACGG CCGCATCGTC
GCGGATCCGG TCGGCGCGGT CCCGTCATGA
 
Protein sequence
MAEIVLETRS VSRSFGAMPA VDGVDLTVRA GEVVAVMGPS GSGKSTLLHL VAGLLRPDSG 
EVWFDGTRLD NQPEHARART RLRHMGFVFQ FGDLVPELTV VENVELPLRL LGTARASARA
RALEMLDRFG IAEQADRRLS EVSGGQAQRA AVARALVHQP AVVLADEPTG SLDTLTGELV
LEELVGAAAE RGTAVVLVTH ELRVASYADR DVLVRDGRIV ADPVGAVPS