Gene Bcav_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4060 
Symbol 
ID7861158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4490340 
End bp4491344 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID643868163 
Productoxidoreductase domain protein 
Protein accessionYP_002884063 
Protein GI229822537 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTTC TGCGCGCCGC CGTCGTCGGC CTTGGCGGGA TCGCCCGCAT CGCTCACCTC 
CCGGTGCTCG CCGACCGCCA GGACGTCGCG GTGGTAGCGG TGGCCGATCC GTCAGCTGCG
GCGCTGGCGC GGCACCCTTC GATCCCCGGC TTCGCCGACG TCCACGAGCT GCTGGCCGCG
GTCGATGTGG ATGCCGCCCT CGTCCTCGCG CCTGAGCAGC ATCACGTCGA AGTCGTGACG
GCGCTGCTGG AGCGCCGGGT ACCGGTGCTC TGCGAGAAGC CGCTGGCGCC GAGCCTCCCG
GAGGCCAGGC TGCTGCGCGA CATTGCCGCC GAGCGCCACA CGTCGCTGAT GGTCGGCTTC
AATCGCCGGT TCGCCCCGGT CTACATGCGG GCCAAGGCCG CGATGTCGGA GCATCCCGCG
GCCGTGGGGG TCTTCGAGAA GACGCGGCCG GAGCGAGGCT ACCGAGGCTC GGCGGAGAAC
CTCGTGCACA TGGTCGACCT GGCCCGCTTC TTCTTCGGCG AATGCGCCGA GGTTACCGCG
CGGGCGGTCT TCGACGACCC GTACTGGGAG GACTCCCTCA CCGCTCTCCT CGAGTTCGAG
GGCGGCCAGC TGGCGACTGT CGTCGGCAAC CGCAGTACCG GGGTGTGGAC CGAGAGGGTG
TCCTTGCACG GAGACGGGCA GTCGGTCACC GTCGTGGCGC CGGACCAGAT CAGCGTGGCC
ACGGGCGGCG AGGAGCGTAC GCATCGGCAG ACCCAGGCCT TTTCAGGGTT CGCCGCCCCG
ACACGCACGC TCGGCTTCGC GGCCCAGGCC GACCACTTCT TCGCGGCAGT CCGGGCCAGC
GCGCAGATCA CGCAGAACGA CGCATCCAGC GCGGTCCGCA CGCAGGAGTT GATGGACCGC
ATCCTGGCCT CCGCCGGGCT ACCCACGACC GATGGACGCA CATCCATGAT GGTCGGTCAC
CGGCCGGCTG TTCCTCCCAA CACACCCGAA GGAGTTGTCC GATGA
 
Protein sequence
MTVLRAAVVG LGGIARIAHL PVLADRQDVA VVAVADPSAA ALARHPSIPG FADVHELLAA 
VDVDAALVLA PEQHHVEVVT ALLERRVPVL CEKPLAPSLP EARLLRDIAA ERHTSLMVGF
NRRFAPVYMR AKAAMSEHPA AVGVFEKTRP ERGYRGSAEN LVHMVDLARF FFGECAEVTA
RAVFDDPYWE DSLTALLEFE GGQLATVVGN RSTGVWTERV SLHGDGQSVT VVAPDQISVA
TGGEERTHRQ TQAFSGFAAP TRTLGFAAQA DHFFAAVRAS AQITQNDASS AVRTQELMDR
ILASAGLPTT DGRTSMMVGH RPAVPPNTPE GVVR