| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4057 |
|---|
| Symbol | |
|---|
| ID | 7861155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4487233 |
|---|
| End bp | 4488066 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643868160 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002884060 |
|---|
| Protein GI | 229822534 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCTAC TGAGTCGGGT CCCGGTGACG GTGGTTCTGG TCGTCGTCAT GGCGTACTGC
ATATTCCCGC TGCTCTGGCT CGTGATCGCG TCGACGAAGG ACGCGACGGA CCTGACCGGC
ACGTCCGGGT TCGTCTTCGC CGACTTCAAC CTCCTCGAGA ACGTCACGAC GCTTGTCGGC
CGCGACGGCG GCATCTATCC TCGCTGGTTC GTGAACTCGC TGGCCTACGC CGGAGTCGGA
GCCGCCGGAT CTACGCTGAT TTGTTTCCTG GCCGGCCACG CCTTCGACAA GTTCGAGTTC
CGTGGCAAGG AGAGGGTGTT CGGCTTCGTC CTGGTCGGCG TGCTCGTACC GGGCGCGGCG
ACGGCACTGC CGTTATATCT GCTCGCCTCG AACCTCGGGA TCGTGAACAC GTACTGGGCC
GTATTGCTGC CCGGACTGGT CAACCCGTTC GGTGTCTACC TCGCCAGGGT GTTCGCCCGC
TCCTACGCGC CGTACGAGCT GGTCGAGGCC GGCCGGTTGG ACGGGTCCCG CGAGTTCGGG
ATCTTCTTCC GGATCGCGCT GCCCTCGATG TGGCCCGGCG TGGTGACATT GTTCCTGTTC
AGCTTCAACG GCATCTGGAA CAACTTCTTC CTGCCGCTGC TCATGCTGAC CGACAGGGAT
CTCTTTCCGG TGGCGCTGGG CTTGTACTTC TGGAACTCCC GGTCGCTCAA CGAGGCCGAC
TACTACCCCA GCGTCATCAT CGGGTCCCTG TTCGCGGTGC TTCCGGTCAT CCTGCTCTTC
ATCTTCCTGC AACGGTATTG GCGAGCCGGA CTCGGATCGG GTGCCCTGAA GTGA
|
|---|
| Protein sequence | MWLLSRVPVT VVLVVVMAYC IFPLLWLVIA STKDATDLTG TSGFVFADFN LLENVTTLVG
RDGGIYPRWF VNSLAYAGVG AAGSTLICFL AGHAFDKFEF RGKERVFGFV LVGVLVPGAA
TALPLYLLAS NLGIVNTYWA VLLPGLVNPF GVYLARVFAR SYAPYELVEA GRLDGSREFG
IFFRIALPSM WPGVVTLFLF SFNGIWNNFF LPLLMLTDRD LFPVALGLYF WNSRSLNEAD
YYPSVIIGSL FAVLPVILLF IFLQRYWRAG LGSGALK
|
|---|
| |