| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4043 |
|---|
| Symbol | |
|---|
| ID | 7861141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4472037 |
|---|
| End bp | 4472705 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643868146 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002884046 |
|---|
| Protein GI | 229822520 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGGG ATGGCGACGG AGCAGCCGGG AGCACGCACG GCGGTGCTCC CGACGACGGC
GTCCAGCGCC AGCGCACGCG CCGGCGTCGG AAGGAGATCC TCGACGTCGC GTCGACGACG
TTCGCCGAGC GCGGGTTCTA CAACTCGTCG CTCGCCGAGA TCGCGGCGGA GGTCGGCATC
ACGGCGGCCG GGATCCTGCA CCACTTCAAG AGCAAGGACC AGCTGCTCAC GGCCCTCCTG
CACGCGCGGG ACCAGCTCCC CGTCGAGGAG GGCGGCCACG GGTCCGAGCT GCACGGGCGG
CAGTTCCTCA GGCATCTCGT GGACACGGCG GAGCGGAACT CGGCCCGCCC GAACGTGACG
CAGCTGTACG CGGTGCTGTC CGCGGAGTCG GTCACGCGGG ACCACCCGGC GCAGGAGTGG
TTCCGCAGCC GGTACTCCGG TCTGCGGGCC ATGGTCGTCG AGGCGCTGGC GGAGGCGCGC
GACGTCGGGG AGCTCCGTGA CGACGCCGAC CTCGAGGAGA CCGCCACGGC GATCATCGCC
GTCATGGACG GGCTGCAGAT TCAATGGTTG CTCTCTCCGG ACGAGGTGGA CATGGCAGCC
GTCACCCGGC GCACGATCGA CGCGCTGCTC GCGTCGCTGG CGCCCGGCGG GGCGAAGACG
GGGGAGTGA
|
|---|
| Protein sequence | MTRDGDGAAG STHGGAPDDG VQRQRTRRRR KEILDVASTT FAERGFYNSS LAEIAAEVGI
TAAGILHHFK SKDQLLTALL HARDQLPVEE GGHGSELHGR QFLRHLVDTA ERNSARPNVT
QLYAVLSAES VTRDHPAQEW FRSRYSGLRA MVVEALAEAR DVGELRDDAD LEETATAIIA
VMDGLQIQWL LSPDEVDMAA VTRRTIDALL ASLAPGGAKT GE
|
|---|
| |