Gene Bcav_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4024 
Symbol 
ID7861122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4451547 
End bp4452347 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID643868127 
ProductABC-2 type transporter 
Protein accessionYP_002884027 
Protein GI229822501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.410206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CCACTGCCTC TGTGCCGGTC CGACCGGCTC GCCCTCCGCG TTCGGCGCTC 
CGCCTGGGGC TGCTGCACGC CAAGTACCAG TTCCTTGAGG CGATCCGCAT CCCGATCGCC
GTCATCGGCA CGATGATGTT CCCGACGCTG GCGATGGTGT TCTTCGTCGT GCCGAACCAG
GCGGTGGCGC AGAACCCGGT CTTTGCGACG GCCGCCGTCG CGCAGCTCGG GATGTTCTCG
ATCATGGCGA CGTGCCTGTT CACGTACGGC ACCGGCGTCG CGGAGGACCG CGACCGGCCG
TTCGACCCGT ACATGCGGAC GCTGCCGGCC GGGGCGTCCG CCCAGATGAT CGGGCGGGTG
GCGAACGGGC TGATCTTCGC GGCGCTCGGG CTGCTGCCGC TGGTGCTGGC GGGGTGGATC
CTCACGGCGG CGACCCTGTC CTGGTCGCGG CTGCTGGTGA GCGTCCTGAC GATCCTCGCG
CTCGCGATCC CGTTCACGAT GCTGGGGCTC GGGATCGGGT ACTCGCTGCC CTCGAAGGCG
GCGATCGCCG TCGTGCAGGT GGTCCTGTTC CCGCTGGCGT TCGCCGGTGG GCTGTTCCTG
CCGCCGCAGA TGTTCCCGGG GTGGCTCGAC GCGTTCTCGC AGGCGCTGCC CTCGCGGGCC
GGGCGGGACC TGCTGGTGCA GGTGACGTCC GGGGAACCGG CCTACGGCCT CGCCCTGCCT
GTGCTCCTCG GGTGGACCGT GCTGTTCGCG GTGTTCGTGG TGTGGGCGTA CCGGCGCGAC
GAGGGGCGCC GCTTCCGCTG A
 
Protein sequence
MTAATASVPV RPARPPRSAL RLGLLHAKYQ FLEAIRIPIA VIGTMMFPTL AMVFFVVPNQ 
AVAQNPVFAT AAVAQLGMFS IMATCLFTYG TGVAEDRDRP FDPYMRTLPA GASAQMIGRV
ANGLIFAALG LLPLVLAGWI LTAATLSWSR LLVSVLTILA LAIPFTMLGL GIGYSLPSKA
AIAVVQVVLF PLAFAGGLFL PPQMFPGWLD AFSQALPSRA GRDLLVQVTS GEPAYGLALP
VLLGWTVLFA VFVVWAYRRD EGRRFR