| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4008 |
|---|
| Symbol | |
|---|
| ID | 7861106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4431513 |
|---|
| End bp | 4432640 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643868111 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002884011 |
|---|
| Protein GI | 229822485 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4402] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTCC TGGGGGTCGT CCGCGCGCTG ATCGGCGCGC CTGTTCGCGC GCGGCGACGC
GCGCTCGTCG CCGTCGGTGC GCTGGTGGGT GCCGGCGCGC TCGTCGTCGT GCCCGGCCCG
GCACAGGCGT GCGGGTGCGG GGGTGTCGTG ACGTCGGAGG CGTACGACGT CGCGATCACG
CACGAACGGG TCCTGCTGCA GTGGGACGGG AGCACCGAGC GCCTGCTCAT GGAGCTGGAC
GCGATCAGTG ACGCGCCGGA GGCCGCGCTC CTGCTTCCCA CCCCGGAGCC CGCCGAGGTC
GAGCTCGGCG ACCCGGCGGT GCTGGACGCC CTCGACGAGG CCTCCCGCCC GGAGGTGGTA
CGGGTCTCCG ACTGGTGGCC GGAGGTCGGC GGGTTCGGCC TCGACGGCGG CGCCGGCGGC
GCACCGGGTG ACCCGGGCGT CGACGTCCTC GACCAGGTCG ACCTCGGTCC CGTCGAGGCC
ACCACGCTCG CCGCGCGGGA CGCCGGCGCG CTCACCGACT GGCTGGACGA GAACGGCTAC
GTGCTCAGCG CCGGCCTCGA GAGCGCGCTC GTGCCGTACG TCGCCGAGGG GTGGTCCTAC
GTGGCGGTGC GCCTCACGCC CGAGGGGAGC GACGCCGTCG CCCTCACCGG GGAGCTCCAG
CCGCTCCAGG TGACGTTCGG CAGCGACACG TTCGTCTACC CGATGCGCCT GTCCTCGGCG
GCCGAGGACA CGCAGCGCGT CCGCACGTAC GTCCTCGCGC CGCAGCGGAC CGACCGGGTG
GACGACCAGG CGGGCGACGC CGAGGTGCGC TTCGCCGGCG AGGTGAGCGC GCAGGACTGG
CCGGCTCTCG CGGACGTGCT CGCCGAGAAC GACGGCTCCG CGTACCTCAC GACGACCGAC
CAGACCTTCA CCGACCCGCC CACGCAGATC TACGCGGACT TCGTGTTCGC GCCGTCCAGC
GGCGGCGACG TCCGCGAGGT CGAGACGATC GTCGTCGACC GCGTGATCCT GGGCCTCCCG
GCGGGGTGGG TGCTCGTGGT GCTCGGCGTC GGCGTGCTCG GCACGGGAGC CGTGCTCGGG
GTGGCCGCTG TGCAAGGACG ACGACGGCGG GCCCGCCTTC GCGCGTAG
|
|---|
| Protein sequence | MGFLGVVRAL IGAPVRARRR ALVAVGALVG AGALVVVPGP AQACGCGGVV TSEAYDVAIT
HERVLLQWDG STERLLMELD AISDAPEAAL LLPTPEPAEV ELGDPAVLDA LDEASRPEVV
RVSDWWPEVG GFGLDGGAGG APGDPGVDVL DQVDLGPVEA TTLAARDAGA LTDWLDENGY
VLSAGLESAL VPYVAEGWSY VAVRLTPEGS DAVALTGELQ PLQVTFGSDT FVYPMRLSSA
AEDTQRVRTY VLAPQRTDRV DDQAGDAEVR FAGEVSAQDW PALADVLAEN DGSAYLTTTD
QTFTDPPTQI YADFVFAPSS GGDVREVETI VVDRVILGLP AGWVLVVLGV GVLGTGAVLG
VAAVQGRRRR ARLRA
|
|---|
| |