| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3968 |
|---|
| Symbol | |
|---|
| ID | 7858031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4388878 |
|---|
| End bp | 4389525 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643868071 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002883971 |
|---|
| Protein GI | 229822445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.194369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AGGGCTGGCG GGACTTCCTG GGCGCGGAGG GCACGGACGA CTGGGTGGTG
CTGCACGGCG GTGCCACGGC CGTCTTCACC GTCCACTCGC TCGCCGACGC GGCGCGGCTC
GCCGAGGCGG TCGCGAGCGT CGCCGGCCTC GACGGATCGG GGGCGGTGCT CACCCTTGCC
GACGCCCGGC TCACCGTCCG GCTCAGCCGC GACCTCTGGT TCCTCGAACC GCGGCACGTC
GCCCTCGCCC AGGCGATCTC GGAGGTCGCG CGTGCCCACG GTGCGCTCCC CGACCGCGGA
GCCGTCCAGG AGGTCCAGCT CGCCGTCGCC GCCAAACCGG ACGAGGTGGA CGTCGGATTC
TGGCGGGCCG TGCTCGGGTA CGCGGAGATG TCCGACGACA ACGCCGTCGA CCCTCTCGGG
CACTCCTCGA CGGTCTGGAT GCAGGAGCTC GACGAGGCGA AGCCGTTGCG GCACGCGATG
CACGGCGACG TGTCCGTGGC TCGCGAGCAC GCCGAGGCGC GCCTGGCCGC GGCGCTCGCG
GCCGGGGGAC GCATCGTCGA CGACTCCGGC GCGCCCGCGA GCTGGATCCT CTCGGACCGC
GCCGGCAACC GCGTCTGCAT CGCGGCCTGG CCCGACGGCG CGCGCTGA
|
|---|
| Protein sequence | MSEQGWRDFL GAEGTDDWVV LHGGATAVFT VHSLADAARL AEAVASVAGL DGSGAVLTLA
DARLTVRLSR DLWFLEPRHV ALAQAISEVA RAHGALPDRG AVQEVQLAVA AKPDEVDVGF
WRAVLGYAEM SDDNAVDPLG HSSTVWMQEL DEAKPLRHAM HGDVSVAREH AEARLAAALA
AGGRIVDDSG APASWILSDR AGNRVCIAAW PDGAR
|
|---|
| |