| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3964 |
|---|
| Symbol | |
|---|
| ID | 7858027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4383917 |
|---|
| End bp | 4384579 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643868067 |
|---|
| Product | NADP oxidoreductase coenzyme F420-dependent |
|---|
| Protein accession | YP_002883967 |
|---|
| Protein GI | 229822441 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.388001 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATCG GAATTCTGGG AACGGGGAAC CTCGCGGTCA CGCTGGGCCA GGCGTGGGCG
CGTGCCGCTC ACTCGATCAT CCTCACTGGT CGAAACGCTG ACCGCGTGAA GGCTGCCGCG
GAGCAGGTGG GCGCGACCGC GATGCCGGTG GAGCCAGACC GGTTCGCCGA GCAGGCGGAT
GTTGTCGTGG TTGCGATCGC CTGGGACGGG CTGGAGCACG CGTTGAGGCT CGTCGGTGGG
CCCGATGGGA CGCTGGCAGG GAAGACAGTC ATCGACTGCA CCAACCCCGT CGACTTCGCG
ACCGGGCGCG TGCTTCCGGA GACCGACTCG GCGGCCGAGC TCGTCGCCGG CGTCGCGGCC
GGCGCCCACG TGGTCAAGGC CCTGCATCTG TTCGCCGGTG CATCGTGGCC CTTCGTCGGC
GAGGCTGGAA CGTCACCCGT CGTCGCCATC TGCGGCGACG ACGGCGAAGC GCTCAGCCAG
ACTGCCTCGC TGATCGCGGA CCTCGGCGCG CGAACCGCGG TGCTCGGTGG GCTGGCCGCT
GCTCGGCAGG CCGAGGAGGC CGCCGGCTTC GTGATGCGGG TTGTCGCCGC AGGCGCGAAC
CCCCGCTTCG CAGTCCCGGA CGTCGACCCG GCCCTTCTTG GCACTGGACC CGCGGACCGG
TGA
|
|---|
| Protein sequence | MKIGILGTGN LAVTLGQAWA RAAHSIILTG RNADRVKAAA EQVGATAMPV EPDRFAEQAD
VVVVAIAWDG LEHALRLVGG PDGTLAGKTV IDCTNPVDFA TGRVLPETDS AAELVAGVAA
GAHVVKALHL FAGASWPFVG EAGTSPVVAI CGDDGEALSQ TASLIADLGA RTAVLGGLAA
ARQAEEAAGF VMRVVAAGAN PRFAVPDVDP ALLGTGPADR
|
|---|
| |