| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3945 |
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| Symbol | |
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| ID | 7858008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4364572 |
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| End bp | 4365738 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 643868048 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002883948 |
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| Protein GI | 229822422 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.213455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTGA TCCGTACCGT CGAGACGTTC CGGCTCCGCA TCGACAAGGG CGCACCGCCG
GACGCGCCGC GTTTCGTCGC GTCGCCGCGG GTGCGGAGCA TCTACCCGAC GGCGGACGAG
ACGCTGCTCG TACGGATCGC GACGGACGAC GCCGTCGGTT GGGGCGAGGC CCTCGCGCCG
GCGTCCCCGG AGGCGCCGGG CGCCCTCGTC GACCACGTCT TCGCGCCCGC CCTGATCGGC
GCCGACCTGG CCACGGGCGT GCGGCCGCTG ACCCGGCGGC TGCAGCAGAC GGGCCGCGAG
CGCGGGCACC TCTCGGGCAT CCAGGCCGAC GCCCTCGCCG CGATCGACAC CGCGCTGTGG
GACCTGCTCG GGCACGAGCT CGGGCTGCCC GCGCACCTGC TCCTCGGCGG GTCCGAGCGC
GCACACGTGC CGGTCTACCT GACCTCGGTG GAGGGGTCCG ACGACGCCGC CCGCGCGGCG
TCCGCCCGCG CCGCCCGGGA CGCGGGCCAC ACCCGGTTCA AGCTGCACCT CACGACGTCG
CCCGAGGAGA CCCTCGCGAG CTACGACGCC GTGAGCGACG CCGTCGGGCC GGGCGCGCGG
ATCGCCGTCG ATGCGCACTG GGTCCACCAG CTCGGGGACG CCCGGCGACT CGCCCGCGGG
CTCGACGAGC GAGGCGCCTG GTTCTTCGAG GCCCCGCTCG CGCCGGAGGA CCTCGCCGGC
CACGTGACGC TCGCGGCCGG GGCGATCACG CCGATCGCCG TCGGCGAGGC CATGCGGCAC
CGGTTCGAGT TCGCCCAGTG GGCGCAGGCC CAGGCGGTGC GCATCGCGCA GCCGGACATC
GGTCGGACCG GGATCACGGA GGGGCTCGCG ATCGCCGGCG TCCTCGAGGC GCAGCACGTG
CCGATCGCGC CGCACCACTC GATGGCCACC GGCATCGCGT ACGCCGCCGG GCTGCACGTG
TGCGCCGCCG CGGACGACCT CCTGGCGATG GAGTGGAGCC CCCACGTGCT GCGGCGGTCC
GCGGGGTTCA TGGACGTCTC GCCGCTTGAG CTCGCCCGCG GCGACGACGG CGGCTCGCCC
CTGGGCGGGT CCGTCCCCCT GCCGAGCGGG CCGGGCCTCG GGCTCACCGT CGACGACGAC
GCCGTCCGGG CGCTGGCCGC CGGCTGA
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| Protein sequence | MGVIRTVETF RLRIDKGAPP DAPRFVASPR VRSIYPTADE TLLVRIATDD AVGWGEALAP
ASPEAPGALV DHVFAPALIG ADLATGVRPL TRRLQQTGRE RGHLSGIQAD ALAAIDTALW
DLLGHELGLP AHLLLGGSER AHVPVYLTSV EGSDDAARAA SARAARDAGH TRFKLHLTTS
PEETLASYDA VSDAVGPGAR IAVDAHWVHQ LGDARRLARG LDERGAWFFE APLAPEDLAG
HVTLAAGAIT PIAVGEAMRH RFEFAQWAQA QAVRIAQPDI GRTGITEGLA IAGVLEAQHV
PIAPHHSMAT GIAYAAGLHV CAAADDLLAM EWSPHVLRRS AGFMDVSPLE LARGDDGGSP
LGGSVPLPSG PGLGLTVDDD AVRALAAG
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