Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3801 |
Symbol | |
ID | 7860540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4219497 |
End bp | 4220300 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643867904 |
Product | ABC-2 type transporter |
Protein accession | YP_002883805 |
Protein GI | 229822279 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC CCGCCGCCTC CATCTACCCC GGTGGTCAGG CGATCCCGGC GCGCCGACCC GGGCCGCGCG CCTGGGTCGC GCTCGTGGGT GCCGAGTCCC GCATGGTGGT CCGCGACACG GCCGGCCTCG TCGTCCCGAT CGCGCTCCCG CTGCTGTTCC TGGTGATGAA CAGCCTCGGC GTCCCGACCG ATCCGCTCCC GGGCGCGGGC GGGATGTCCG CGTTCGACGT CTTCGTCGTG CCGCTCATCC TCACCATCGT GATCGCGACC ATCGGGGTGG TCAACATGCC GAGCTTCCTC GCGTACTACC GCAAGGGCGG CGTGCTGCGC CGGCTGGCCG TCACGCCGGC GTCGCCCGGG ATGATCCTCG TGGCCCAGGT CATCACGAGC GCCCTCCAGA CGATCGTCGG CATCGCGCTC GCGCTCGGCG TGGCGGTGCT CTGGCTCGGC GCACAGCTGC CGGCGCGACC GGGGCTCGCC ATCGGCGTCC TGGCTCTCGC CGCCGCGGCG ATGTACGCGC TCGGCATGGC CGTCGCGGCG CTCGCGCCGT CCGGAAACGC GGCGACGGCG ACCGGTCTGG GGCTGTTCTT CGCCCTCGGT GCGATCGGCG GGATGTTCGG ACCGACGACG AACCTGCCGG ACGGCGTCGC CCGCGTGGGG GAGATGCTGC CGTTCGGCGC GTCCGTGCAG GCCCTGAGCG CCGCGTGGGT GGGTCAGGTG CCGGAGCCGC AGCACCTGGT GGCACTCGCG GTCACCGTCG TCGTGAGCGG AGGAGTGGCC GCGCGCTTCT TCCGCTGGGA GTGA
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Protein sequence | MTAPAASIYP GGQAIPARRP GPRAWVALVG AESRMVVRDT AGLVVPIALP LLFLVMNSLG VPTDPLPGAG GMSAFDVFVV PLILTIVIAT IGVVNMPSFL AYYRKGGVLR RLAVTPASPG MILVAQVITS ALQTIVGIAL ALGVAVLWLG AQLPARPGLA IGVLALAAAA MYALGMAVAA LAPSGNAATA TGLGLFFALG AIGGMFGPTT NLPDGVARVG EMLPFGASVQ ALSAAWVGQV PEPQHLVALA VTVVVSGGVA ARFFRWE
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