Gene Bcav_3801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3801 
Symbol 
ID7860540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4219497 
End bp4220300 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content73% 
IMG OID643867904 
ProductABC-2 type transporter 
Protein accessionYP_002883805 
Protein GI229822279 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC CCGCCGCCTC CATCTACCCC GGTGGTCAGG CGATCCCGGC GCGCCGACCC 
GGGCCGCGCG CCTGGGTCGC GCTCGTGGGT GCCGAGTCCC GCATGGTGGT CCGCGACACG
GCCGGCCTCG TCGTCCCGAT CGCGCTCCCG CTGCTGTTCC TGGTGATGAA CAGCCTCGGC
GTCCCGACCG ATCCGCTCCC GGGCGCGGGC GGGATGTCCG CGTTCGACGT CTTCGTCGTG
CCGCTCATCC TCACCATCGT GATCGCGACC ATCGGGGTGG TCAACATGCC GAGCTTCCTC
GCGTACTACC GCAAGGGCGG CGTGCTGCGC CGGCTGGCCG TCACGCCGGC GTCGCCCGGG
ATGATCCTCG TGGCCCAGGT CATCACGAGC GCCCTCCAGA CGATCGTCGG CATCGCGCTC
GCGCTCGGCG TGGCGGTGCT CTGGCTCGGC GCACAGCTGC CGGCGCGACC GGGGCTCGCC
ATCGGCGTCC TGGCTCTCGC CGCCGCGGCG ATGTACGCGC TCGGCATGGC CGTCGCGGCG
CTCGCGCCGT CCGGAAACGC GGCGACGGCG ACCGGTCTGG GGCTGTTCTT CGCCCTCGGT
GCGATCGGCG GGATGTTCGG ACCGACGACG AACCTGCCGG ACGGCGTCGC CCGCGTGGGG
GAGATGCTGC CGTTCGGCGC GTCCGTGCAG GCCCTGAGCG CCGCGTGGGT GGGTCAGGTG
CCGGAGCCGC AGCACCTGGT GGCACTCGCG GTCACCGTCG TCGTGAGCGG AGGAGTGGCC
GCGCGCTTCT TCCGCTGGGA GTGA
 
Protein sequence
MTAPAASIYP GGQAIPARRP GPRAWVALVG AESRMVVRDT AGLVVPIALP LLFLVMNSLG 
VPTDPLPGAG GMSAFDVFVV PLILTIVIAT IGVVNMPSFL AYYRKGGVLR RLAVTPASPG
MILVAQVITS ALQTIVGIAL ALGVAVLWLG AQLPARPGLA IGVLALAAAA MYALGMAVAA
LAPSGNAATA TGLGLFFALG AIGGMFGPTT NLPDGVARVG EMLPFGASVQ ALSAAWVGQV
PEPQHLVALA VTVVVSGGVA ARFFRWE