Gene Bcav_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3797 
Symbol 
ID7860536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4212907 
End bp4214154 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content72% 
IMG OID643867900 
Productprotein of unknown function UPF0261 
Protein accessionYP_002883801 
Protein GI229822275 
COG category[S] Function unknown 
COG ID[COG5441] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG TCGCCGGTGC CCAGCACGAG AGACCGTGCG TCCTTCTCGT CGGTGCCCTC 
GACACGAAGG GCCCCGAGTT CGAGTTCCTT CGGTCAGAAG GGCTGCGTCT CGGCTGCGAC
GTCCTGCTGC TCGACGTGGG GGTGCTGGGG GCGCCGGCGG TGCTCGCGGA CTTCCCGCGC
GAGGCGGTCG CCGACGCCGC CGGTGCGGAG CTCGGGGCTC TGGTCTCGAC CGGGGACCGG
AGCGTGGCGG TGAGCGCGAT GGCCCGCGGG GCCGCCCGGC TGGCGGCGGC ACTCGCTGAC
GAGGGCCGGA TCGACGGCGT GATCGGTGCG GGCGGCTCCA ACGCGGCCTA CGTCATGGCG
CGCGTCAGCG AGCGGCTCGA CGTGGGGTTC CCCAAGGTCC TCGTCTCGAC CATGGCCTCG
GGCGACACGG CCCGGTACGT CGGCTCGACC GACCTCACGA TGATGAACTC GGTCGTGGAC
GTCAACGGCC TGAACCGGGT CACCCGATCC GTCCTCGGCA ACGCGATCCA CGCCGTCGTC
GGCATGGTCA CCAGTCGGGT CCCCGACGAC GGGACAGACC GCCCGGTCGC CGCGATCTCG
ATGTTCGGCG TCACGACCCC GTGCGCGAGC CGGATCGCGT CGACCCTCGA CGCCGCGGGC
CTCGAGCCGT TGAGCTTCCA CGCGAACGGC GCCGGTGGCC GCTCCCTCGA GGCGCTGGCC
GGGTCGGGTG CGATCCAGGT GGTGGTCGAC ATGACGACCA CGGAGCTGGC CGACGAGCTG
TTCGGAGGCG TGTGCAGCGC GGGGCCGGAC CGGCTGACGG CGGCGGGCCG GCTGGGCGTG
CCGCAGGTCG TCAGCCTCGG TGCGCTCGAC ATGATCAACT TCGGCGCCGC CGCGGCCCTC
CCGGAGCACC TGCGCGGCCG GCTCTGGCAC GAGCACAACC CCGAGGTGAC GCTCGTCCGG
ACGAACGCCG AGGAGTGTGC GGAGCTCGGT GGCGTGCTCG CCGCGCGACT CAACGCCGCC
CTCGGACCCC GGACTGTCGT CGTGCCCGCA CGCGGCTTCT CCGCGCTGTC GGTACCAGGT
GAGCCGTTCC AGGATCCTCA CGCGGACCGC GCCCTCGTCG ACGCCCTGCT CGGTGCCCTG
GACGACGACG TCACGAGCGT CGTCCTCGAC GTCGACATCA ACGACCCACT CGTCGCGGAC
GCGATGTCCC GCGCCACCCT GAGCCTCATG GAGGAAGCAC GTGTCTGA
 
Protein sequence
MSNVAGAQHE RPCVLLVGAL DTKGPEFEFL RSEGLRLGCD VLLLDVGVLG APAVLADFPR 
EAVADAAGAE LGALVSTGDR SVAVSAMARG AARLAAALAD EGRIDGVIGA GGSNAAYVMA
RVSERLDVGF PKVLVSTMAS GDTARYVGST DLTMMNSVVD VNGLNRVTRS VLGNAIHAVV
GMVTSRVPDD GTDRPVAAIS MFGVTTPCAS RIASTLDAAG LEPLSFHANG AGGRSLEALA
GSGAIQVVVD MTTTELADEL FGGVCSAGPD RLTAAGRLGV PQVVSLGALD MINFGAAAAL
PEHLRGRLWH EHNPEVTLVR TNAEECAELG GVLAARLNAA LGPRTVVVPA RGFSALSVPG
EPFQDPHADR ALVDALLGAL DDDVTSVVLD VDINDPLVAD AMSRATLSLM EEARV