| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3789 |
|---|
| Symbol | |
|---|
| ID | 7860528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4205678 |
|---|
| End bp | 4206442 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643867892 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002883793 |
|---|
| Protein GI | 229822267 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0962243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG AACCGCAGCC CGGCGGCCCG GGCGGCGACG TCGCGCTCGC GCTCGACGGC
GTCACGAAGC AGTTCCCGAC CGGCACGGTC GCGCTGGAGG ACGTGAGCAT GCGCCTCGCC
GCCGGGGAGT TCGTGACGGT GGTCGGCCCG TCCGGCTGCG GGAAGACGAC GTTGCTGCGC
CTTGCCGCCG GACTCGAGGA CGCGACGGGC GGCGCCGTCG CGGTGAACGC GGCCGCCACC
AGCTACGTGT TCCAGGATGC GACCCTGCTC GAGTGGCGCA GCGCCGCGAA GAACGTGGAG
CTCGTCGGCG AGCTGCGCGG GGTGCCCCGT GCCCGGCGGC GGCAGGCCGC CCAGGATGCC
CTCGACCTCG TGGGGCTCAC CGGCTTCGAG AAGCAGCACC CGCGCCAGCT GTCCGGCGGC
ATGCGCATGC GGGTGTCGAT CGCCCGCGCC CTCGTGGCCG AGCCGGACCT CGCGCTCTTC
GACGAACCGT TCGGAGCCCT CGACGAGATC ACCCGTCTCT ACATGCAGAC CGAGCTGCAG
CGCCTGTTCG TGCTCAAGCA GTTCGCCGGC CTGTTCATCA CGCACTCCGT CTCGGAAGCC
GTCTACCTCT CCACGAGGGT GCTCGTCATG AGTGGGCGGC CGGGCCGGCT CGTGGCCGAG
ATCCCGGTGC CCTGGGCGTA CCCGCGGCCG GCCGAGCTGC GGTTCACCGG CGAGTTCGCC
GCGCTCACCG GCGAGGTCTC CGCGGCCCTC GGGGAGCACG CATGA
|
|---|
| Protein sequence | MSAEPQPGGP GGDVALALDG VTKQFPTGTV ALEDVSMRLA AGEFVTVVGP SGCGKTTLLR
LAAGLEDATG GAVAVNAAAT SYVFQDATLL EWRSAAKNVE LVGELRGVPR ARRRQAAQDA
LDLVGLTGFE KQHPRQLSGG MRMRVSIARA LVAEPDLALF DEPFGALDEI TRLYMQTELQ
RLFVLKQFAG LFITHSVSEA VYLSTRVLVM SGRPGRLVAE IPVPWAYPRP AELRFTGEFA
ALTGEVSAAL GEHA
|
|---|
| |