| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3771 |
|---|
| Symbol | |
|---|
| ID | 7859911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4184847 |
|---|
| End bp | 4185833 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643867874 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_002883775 |
|---|
| Protein GI | 229822249 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG ACCAGACGCC GGACGCCGGC GCGACCCGAA CGGAGCCCTC AGTGAGCGCC
TCCCATCTCC GCGGGATCGT CCCGCCGGTG ATCACCCCGT TCCACGCCGA CGGGGAGGTC
GACACCGCTT CGCTCGCTCG CGTCGTCGAG CACCTGGTCG GAGCGGGCGT GCACGGGGTG
TTCGCACTCG GCTCCAGCGG CGAGGTCGCG TACCTCGGAC GGGAGCAGCG GTCTGTCGTC
CTCGACACCG TCGTGCGGAC GGTGGCCGGC CGCGTCCCGG TACTCGCTGG CGCCATCGAC
CTCACGGCCC GCCGCGTCCT CGAGCAGGTG GACGACGCCG TCGGCGCCGG CGTGGACGGC
GTCGTCACCT GCGCGCCGGT GTACGCCCGC AACGACCGGG CCGAGATCGC CGACCACTTC
CGGGCGATCG CGGCCGGGAG CCCGGTGCCC GTCTACGCGT ACGACATCCC CGTGCGCGTC
GGGACGAAGC TGGACGCGGC GATGGTCGTC GCGCTCGGGA GCGAGGGCGT GCTGGCGGGG
GTGAAGGACT CCTCCGGCGA CGACGTCGGG TTCCGCCGGC TGGTCGCCGC CAACGCCGCC
GCCGGGGCAC CGCTGAGCGT CCTCACGGGC CACGAAGTCG TCGTGGACGG CATGCTCCTG
CTCGGCGCCG ACGGCGTGGT CCCCGGCCTC GGGAACGTCG ACCCGGGCGC GTACGTGCGG
ATGTGGGACC TCGCGCAGGC CGGGGACTGG GAGCAGGTGC GCCCCGAGCA GGACCGGCTG
GCGGCCCTGT TCGAGATCGT GTTCCAGGCG AGCGGGCGCT CGGGCGACGC CGCGGGCGTC
GGTGCCTTCA AGGTGGCGAT GCACGCGCTG GGTCTGCTCG ATGCGCCGAC CATGGCGCCA
CCGGTCGGTC CGTTCGACGC CGACACCGTC GCGCGGATCA CGGGCATCGT GCGCGCCGCC
GGGCTGCGGG AGGTCGCGCG CACGTGA
|
|---|
| Protein sequence | MTPDQTPDAG ATRTEPSVSA SHLRGIVPPV ITPFHADGEV DTASLARVVE HLVGAGVHGV
FALGSSGEVA YLGREQRSVV LDTVVRTVAG RVPVLAGAID LTARRVLEQV DDAVGAGVDG
VVTCAPVYAR NDRAEIADHF RAIAAGSPVP VYAYDIPVRV GTKLDAAMVV ALGSEGVLAG
VKDSSGDDVG FRRLVAANAA AGAPLSVLTG HEVVVDGMLL LGADGVVPGL GNVDPGAYVR
MWDLAQAGDW EQVRPEQDRL AALFEIVFQA SGRSGDAAGV GAFKVAMHAL GLLDAPTMAP
PVGPFDADTV ARITGIVRAA GLREVART
|
|---|
| |