Gene Bcav_3752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3752 
Symbol 
ID7859892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4170587 
End bp4171381 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content76% 
IMG OID643867855 
ProductDi-trans-poly-cis-decaprenylcistransferase 
Protein accessionYP_002883756 
Protein GI229822230 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGAC CTGCGCTGCC TGGTGCCGCG TTCGCGCGGC GCGCTGCCGA GGGCCTCGCC 
GAGCGCCGGC TCGAGCGTGC CCTCGCCGGG GCGCCGGTCC CGCGGCACGT CGGGCTGGTC
ATGGACGGCA ACCGACGGTG GGCGCGCCTC GCCGGCTCGC TCGACCCGCG CGTCGGCCAC
CGGGCCGGCG CTGAGCACCT GAGCGTCGTC CTCGGCTGGT GCGCCCGAGC GGGCATCGAC
CGCGCGAGCG TCTACGTGCT GTCGGCGGCG AACATCGCCA AGCGCGGCCC GGACGAGGTC
GCGCACCTCA TGACGCTGCT CGAGACCACG ATCGCCCGGC AGCGCCGGGA CGACGCCGAG
TGGTCGCTCG CCGTCGCCGG CTCGCTCGAT CTCCTTCCCG ACCGCACCGC TCACGCGCTC
AAGGAGGCGA TCGACGCGAC GGCGGGGCGG CCCCGCTCCC TCACGCTCGC GATCGGGTAC
GACCCGCACG AGGAGATCGC CGCCGCCGTC CGGGCCCATC TCGCGGATGC TGCCGACGAC
GCCGGACGGC CCGGCGCGAC GCTGACCGAC CTCGCGCGCG CGTTCGACGC CGACGACCTC
GACGCGCGGA TCCCGGGCGG CTCCGACATC GACCTGGTCA TCCGCACGAG CGGCGAGCGG
CGGCTCTCCG GTTTCTTCCC GTGGCGCAGC GCGGGCGCGG AGCTCGTGTT CTGCGACGTG
TACTGGCCCG GGTTCCGCCG CCTGGACTTC CTGCGGGCGC TGCGCACGTA CGCGCAGCGG
GTCGGCACGC GCTGA
 
Protein sequence
MNGPALPGAA FARRAAEGLA ERRLERALAG APVPRHVGLV MDGNRRWARL AGSLDPRVGH 
RAGAEHLSVV LGWCARAGID RASVYVLSAA NIAKRGPDEV AHLMTLLETT IARQRRDDAE
WSLAVAGSLD LLPDRTAHAL KEAIDATAGR PRSLTLAIGY DPHEEIAAAV RAHLADAADD
AGRPGATLTD LARAFDADDL DARIPGGSDI DLVIRTSGER RLSGFFPWRS AGAELVFCDV
YWPGFRRLDF LRALRTYAQR VGTR