Gene Bcav_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3726 
Symbol 
ID7859866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4142642 
End bp4144381 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content75% 
IMG OID643867829 
ProductABC transporter related 
Protein accessionYP_002883730 
Protein GI229822204 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.232879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0338159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CAGCGTTCGC CGTCGCCCCG CCCGCCGCCG TCCTGCGCGC CGGCCGTGCC 
CTGGTCCGCC GGCACCGGGG GCGCCTCGCC GTCGTCACCG CCACGTTCCT GCTCGCGGCC
GGGTGCGGGC TCGTCGGACC GTGGGCGGTG GGCCGGATCG TCGACGAGGT GAGCGGCGAC
GGCGGCGTCG ACGCCGTGGC GCGCTACGGC GTCGTGATGG CGATCGCCCT CGCGGGCCAG
GCGGCGTTCT CGGCGCTCGC CGGGCTCATC GGCATGCGCA CCGGCGAGCG CGTGTTCGCC
GACCTGCGCG AGAGCTTCAT GACCGCCGTG ACCCGCCTGC CGCTCGGCGC GGTCGAACGC
GCGGGGACGG GCGACCTCGT GACCCGGACC ACCCGCGACG TCGGCATGGT CTCCGACACC
GTCAGGTTCG GCCTTCCGCA GCTCCTCCAG CTGGTGGTCA CCGTCGTCGC GACAGTCGTG
GCGGCGGTCC TCGTCGACGC GCGGGTCAGC CTGGCCATGC TCGTGATCCT GCTCGTCGGG
CCGGTCGTCG TCTGGTACCT GCGCCGTTCC CGTCCCGTGT GGGAGCGGGT CGGCGCCGCG
TTCTCGGACG TCGGGGAGGA CGTGTCCGCC AACGCGCGAT CCGCCCGCGA CATCGACCTG
CTCGGCCTCG ACGGCGTCCG TCGCGACGCC GTCGACTCCT CGCTCCGCGG CCTGTATCGG
GCGCGGCGTC ACGAGGTCTT CCTCCGCACC GTGCTCATCC CGTCGACGAA CCTGGCGTTC
TCCGTGCCGC TCGTGGTCAC GCTGCTGTGG GGCGGGTGGC TCGCGGAGCG CGGGATGGCG
ACGGCGGGCG CCGTCGCCGC CGTCGTGCTC TACAACGGGC AGCTCGCGCG GCCCGTGGAG
CAGCTCATCG ACTGGGTGGA CGAGCTGCAG CAGAGCTGGG TGTCGTACGC CCGGATCCTG
GGCGTCGAGT CCGACGTCGA GCGCGGGGTC GCCGCGTCGG AGGACGCTGC GAGCCTGCAG
GGCGCGCTCG AGCTCGACCG GGTGACGTTC GCCTACCGGC CGGGCGAGGA CGTGCTGCAC
GGTGTGTCCT TGGCGACGAC GCCGGGGGAG CGCCTCGCCG TCGTCGGGCC CTCCGGCTCG
GGCAAGTCCA CGATCGCGCG GCTCATGAGC GGGATCGACC GGCCCCGGAC CGGCGCGGTG
CGCATCGGGG GCGTCGACCT CGCGGGCTTC GGCGCCCAGG AGGTCCGGCG CACGGTGTGC
CTGGTGACCC AGGAGCACCA CGTGTTCGTC GGCACGCTCG CGGAGAACCT GCGGCTGGCC
CGCCGCGGCG CCACCGACGG CGAGCTCGAG GGGGCGCTGC GCGCCGTCGG CGTCGACTGG
CAGGGGGAGC TGGACGACGG GCTCGACACC TCGGTCGGCG CCGGCGGCCT GGCGCTCACG
CCGGTGCAGG CGCAGCAGGT GGCGCTCGCT CGGGTGCTCC TGCTGGATCC CGACATCCTC
GTGCTGGACG AGGCGACGTC GATGTTCGAC GCGACCAGCG CGCGCACGTC GGAACGTGCG
GTGTCCGCCG CGCTCGCCGG GCGCACCGTC GTCGCCATCG CGCATCGTCT GCAGACCGCG
GCCGACGCCG ACCGGGTGGC GGTGGTGGTC GACGGACGGG TGCTGGAGCT CGGCTCCCAC
GACGAGCTCC TCGACGCCGA CGGCGAGTAC GCCCGCCTGT GGCGCGCCTG GCAGGGCTGA
 
Protein sequence
MAETAFAVAP PAAVLRAGRA LVRRHRGRLA VVTATFLLAA GCGLVGPWAV GRIVDEVSGD 
GGVDAVARYG VVMAIALAGQ AAFSALAGLI GMRTGERVFA DLRESFMTAV TRLPLGAVER
AGTGDLVTRT TRDVGMVSDT VRFGLPQLLQ LVVTVVATVV AAVLVDARVS LAMLVILLVG
PVVVWYLRRS RPVWERVGAA FSDVGEDVSA NARSARDIDL LGLDGVRRDA VDSSLRGLYR
ARRHEVFLRT VLIPSTNLAF SVPLVVTLLW GGWLAERGMA TAGAVAAVVL YNGQLARPVE
QLIDWVDELQ QSWVSYARIL GVESDVERGV AASEDAASLQ GALELDRVTF AYRPGEDVLH
GVSLATTPGE RLAVVGPSGS GKSTIARLMS GIDRPRTGAV RIGGVDLAGF GAQEVRRTVC
LVTQEHHVFV GTLAENLRLA RRGATDGELE GALRAVGVDW QGELDDGLDT SVGAGGLALT
PVQAQQVALA RVLLLDPDIL VLDEATSMFD ATSARTSERA VSAALAGRTV VAIAHRLQTA
ADADRVAVVV DGRVLELGSH DELLDADGEY ARLWRAWQG