Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3726 |
Symbol | |
ID | 7859866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4142642 |
End bp | 4144381 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867829 |
Product | ABC transporter related |
Protein accession | YP_002883730 |
Protein GI | 229822204 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.232879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0338159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAGA CAGCGTTCGC CGTCGCCCCG CCCGCCGCCG TCCTGCGCGC CGGCCGTGCC CTGGTCCGCC GGCACCGGGG GCGCCTCGCC GTCGTCACCG CCACGTTCCT GCTCGCGGCC GGGTGCGGGC TCGTCGGACC GTGGGCGGTG GGCCGGATCG TCGACGAGGT GAGCGGCGAC GGCGGCGTCG ACGCCGTGGC GCGCTACGGC GTCGTGATGG CGATCGCCCT CGCGGGCCAG GCGGCGTTCT CGGCGCTCGC CGGGCTCATC GGCATGCGCA CCGGCGAGCG CGTGTTCGCC GACCTGCGCG AGAGCTTCAT GACCGCCGTG ACCCGCCTGC CGCTCGGCGC GGTCGAACGC GCGGGGACGG GCGACCTCGT GACCCGGACC ACCCGCGACG TCGGCATGGT CTCCGACACC GTCAGGTTCG GCCTTCCGCA GCTCCTCCAG CTGGTGGTCA CCGTCGTCGC GACAGTCGTG GCGGCGGTCC TCGTCGACGC GCGGGTCAGC CTGGCCATGC TCGTGATCCT GCTCGTCGGG CCGGTCGTCG TCTGGTACCT GCGCCGTTCC CGTCCCGTGT GGGAGCGGGT CGGCGCCGCG TTCTCGGACG TCGGGGAGGA CGTGTCCGCC AACGCGCGAT CCGCCCGCGA CATCGACCTG CTCGGCCTCG ACGGCGTCCG TCGCGACGCC GTCGACTCCT CGCTCCGCGG CCTGTATCGG GCGCGGCGTC ACGAGGTCTT CCTCCGCACC GTGCTCATCC CGTCGACGAA CCTGGCGTTC TCCGTGCCGC TCGTGGTCAC GCTGCTGTGG GGCGGGTGGC TCGCGGAGCG CGGGATGGCG ACGGCGGGCG CCGTCGCCGC CGTCGTGCTC TACAACGGGC AGCTCGCGCG GCCCGTGGAG CAGCTCATCG ACTGGGTGGA CGAGCTGCAG CAGAGCTGGG TGTCGTACGC CCGGATCCTG GGCGTCGAGT CCGACGTCGA GCGCGGGGTC GCCGCGTCGG AGGACGCTGC GAGCCTGCAG GGCGCGCTCG AGCTCGACCG GGTGACGTTC GCCTACCGGC CGGGCGAGGA CGTGCTGCAC GGTGTGTCCT TGGCGACGAC GCCGGGGGAG CGCCTCGCCG TCGTCGGGCC CTCCGGCTCG GGCAAGTCCA CGATCGCGCG GCTCATGAGC GGGATCGACC GGCCCCGGAC CGGCGCGGTG CGCATCGGGG GCGTCGACCT CGCGGGCTTC GGCGCCCAGG AGGTCCGGCG CACGGTGTGC CTGGTGACCC AGGAGCACCA CGTGTTCGTC GGCACGCTCG CGGAGAACCT GCGGCTGGCC CGCCGCGGCG CCACCGACGG CGAGCTCGAG GGGGCGCTGC GCGCCGTCGG CGTCGACTGG CAGGGGGAGC TGGACGACGG GCTCGACACC TCGGTCGGCG CCGGCGGCCT GGCGCTCACG CCGGTGCAGG CGCAGCAGGT GGCGCTCGCT CGGGTGCTCC TGCTGGATCC CGACATCCTC GTGCTGGACG AGGCGACGTC GATGTTCGAC GCGACCAGCG CGCGCACGTC GGAACGTGCG GTGTCCGCCG CGCTCGCCGG GCGCACCGTC GTCGCCATCG CGCATCGTCT GCAGACCGCG GCCGACGCCG ACCGGGTGGC GGTGGTGGTC GACGGACGGG TGCTGGAGCT CGGCTCCCAC GACGAGCTCC TCGACGCCGA CGGCGAGTAC GCCCGCCTGT GGCGCGCCTG GCAGGGCTGA
|
Protein sequence | MAETAFAVAP PAAVLRAGRA LVRRHRGRLA VVTATFLLAA GCGLVGPWAV GRIVDEVSGD GGVDAVARYG VVMAIALAGQ AAFSALAGLI GMRTGERVFA DLRESFMTAV TRLPLGAVER AGTGDLVTRT TRDVGMVSDT VRFGLPQLLQ LVVTVVATVV AAVLVDARVS LAMLVILLVG PVVVWYLRRS RPVWERVGAA FSDVGEDVSA NARSARDIDL LGLDGVRRDA VDSSLRGLYR ARRHEVFLRT VLIPSTNLAF SVPLVVTLLW GGWLAERGMA TAGAVAAVVL YNGQLARPVE QLIDWVDELQ QSWVSYARIL GVESDVERGV AASEDAASLQ GALELDRVTF AYRPGEDVLH GVSLATTPGE RLAVVGPSGS GKSTIARLMS GIDRPRTGAV RIGGVDLAGF GAQEVRRTVC LVTQEHHVFV GTLAENLRLA RRGATDGELE GALRAVGVDW QGELDDGLDT SVGAGGLALT PVQAQQVALA RVLLLDPDIL VLDEATSMFD ATSARTSERA VSAALAGRTV VAIAHRLQTA ADADRVAVVV DGRVLELGSH DELLDADGEY ARLWRAWQG
|
| |