Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3681 |
Symbol | |
ID | 7861023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4095181 |
End bp | 4098030 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643867784 |
Product | alpha-L-rhamnosidase |
Protein accession | YP_002883685 |
Protein GI | 229822159 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.697625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.500239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG ACGCCCGCTT CGCGCCCGCG GCACGCTGGA TCTGGGACGA CGGCGAGCCG TCGCCCCGCA ACGCCTGGCG GTGCTTCCGG CGCACGGTCA CGATCGACGA CGACGAGCCG GACGCCCGGC TCCGCGTCAC CGCCGACACC CGGTACGTCG CGTACGTCAA CGGCGTCCGG GTCGGGCACG GACCGGTGCG CGGTTTCCCG GAGCACTGGT TCGTCGACGA CTGGGAGGTC GGGCACCTGC TCCGGCCCGG GGCGAACGTC GTCGCCGTCC TCGTCCGGCA CGACGGCGTC GCGACGTTCT CGTCGCTGCG CGCTCGCGGT GGGCTGCTCG CCCAGCTCGA CCTCCCGGCG TCGTCGACCC ACGTCGTGAG CGACCCGAGC TGGCAGGTCG CGACGCACGC CGGGTTCGAC GCACGCTCCC CCCGCATCTG CCCGCAGCTC GCGTTCGTCG AGGTCGTGGA CGGCGCGTGG CAGCCCACGT GGACGACGGA CGTCGCCGAG CCGGCGACCG ACGACGGCTG GGCGCCGGCG ACGGTCGTCG GCGAGCCGGG CCAGGGGCCG TGGTCGCGCC TGGTCGCACG GGACGTGCCC GCGCTCGCGG AGGAGCTCGT GCGCCCCGTC CGGGTCGGGT CGCTGGCGTT CGTGCGCGCC GCGCCGACGA GCTGGACCCT CGACGCCCGC GCCCTGTTCG ACCCCAGCTC CGAGCATCAC GCGAACCCCA GCTCCTACGT CGGGTTCCTG CTCACCGCGA TCCGCGTGCA CCGACCCGCG CGGGTGCGGA TCGCCCTGCC GCTGGCGACG TCCAACGGCC GCGTGTCCGG AGTGGCCCTC GACGGCGCGT GGACCCCGGT CTCGGACCTC GCCGCGGGGC ACGCGGACCT GCGGACGCTC GACGTCGACC TCGCCTCGGG CGACCACTGG CTCGCGCTCG ACGTCTCCGC GTACGACCAC GGGTACCCGG TGCCGGTGAT GCTCGAGGCG CTCGACGGCG CCGACGTCGC GCTCGTCCAC CCCACTCAGG GCGACGCCGC GACGCCGTGG GTCGCGCTGG GCCCGGTCGG CGCACCCGAC CCGGCGTTCG AGCGGCCGCT CGCGCACCCC GCCCTGGAAC GCATGACGCC GACGCCCGAG ACGCGGGGCG CCGTCGTCGA GGCGACAGCT GCCCGCGAGC TCGGTGCCTG GCCGCACGCG GCGCGCACCG TCCCGGCCGA GCTGGCGTTC CCGGCCAGCC TGTACGGCGT CGTCGTGCAC CCGAGCGAGC GGGACGCCGT CGTCGTCCCC AGCGCCGTGC AGGCGCTCGC CGGGGGCGGG TCGGCGGCCG TGCCGCACCG GCCCGGGCGC GACACGGAGC TCGTGCTCGA TCTCGGCGTC GAGGCGTCCG GCTTCGTCGA GCTGGAGCTC ACCGCACCGC CCGGCGTGGT CGTCGACGTC TACGGCTTCG AGTACCTCCG CGACGGCTAC CGCGAGGAGA CGACCGGCAT GGAGAACGCG CTGCGGTACA CCACGCGCAC CGGCCGTCAG CGGCACGTCT CGCCGGTGCG GCGCGGACTG CGGTATCTGC AGCTCGTCGT GCGCCGGCCC GACGACGCCG CGGGGCCGGT CGTGCTGCAC GACGTCGCCG TACGCAGCGC CCACTACCCG ATGCCGCGGA CGGGCGAGTT CTCGTGCAGC GACACCCGGC TCGACGCGAT CTGGGAGATG TCGCGGCGGA CCGTCGTGGC CTGCGCGGAG GACACGTTCG TCGACTGCCC CGCCTACGAG CAGGCGTACT GGGTGGGTGA CGCGTACTCG AGCGCACGGT TCGCGTCGGC GCTCGCCGAC GTCGGCCCGC TCGTGGAACG CTGCCTGCGG CTCGTGCCGG GCTCGCGCGG CCAGACCCCG CTGCTCGGGT CCCAGGTGCC GTCCGGCTGG ACGAACGTGA TCCCGGCGTG GACGTTCTTC TGGGTGCTGG CGTGCGAGGA GCATGCCGTG CGGTCGGGCG ACCCAGGCTT CGCGCGGGAC CTCGCCCCCG ACGTCGTGGC GGCGCTCGAC GCGTTCGCCG AGCACCTCGA CGAGCGCTCA CTGCTGGCGA TCGACGCGTG GAACCTCCTC GACTGGGCGC CGATGGACCA GCCGAACTCC GGCGTCGTCG CGCACCAGAA CTGCCTGTAC GTGATGGCGC TCGACGGCGC GGCTCGGCTC GCGGACGCCG TCGGCCTGGA CGTGGGGGAG CGGTTGCGGG CGCGGGCGTC GGCCGTGCGG GCGGCGATCG CGGAGCACCT GTGGTCCCCC GAGCGGGAGG CGTACCTCGA CGCGATCCAC GCTGACGGCC GCCGGTCCGA CGTCGTCAGC GTGCAGACGC AGCTGTTCGC TCTGCTCGCC GGGGTCGGCG ACGATTCCCG CCTGGCCCGG CTGACGTCGC TCGTCGTGGA CCCGCCTCAC GACCTCGTGC AGATCGGCAG CCCGTGGATG TCGATCTTCC GGTACGACGC CCTCGTCGCG GCCGGGCGCG CGGACGTGGC GCTCGCCGAC CTGCGCCGGG ACTACGGCGG GATGCTCGAC GCCGGCGCGG TCACCTGCTG GGAGATGTTC CCGGCGCCGG ACCGCGCATC GCTGACCCGC AGCCACTGCC ACGCCTGGTC GGCGGCGCCG GCCGCGTTCC TTCCGAACGT CGTGCTGGGC GTGCGCCTGG ACGGTCCTCG CCGCGTGGTC GTCGACCCCC AGCCGCTCGG CCTGGACTGG GCGCGCGGCG CGATCCCGCT CCCCGGCGGC GGGCGGGTGG AGGTGGCGTG GGAGCGGCGC GCCGACGGCA CGCTCGACGT GCGCGTCGAC GCGCCCGACG GCGTCGAGGT GGGGCGCTGA
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Protein sequence | MSDDARFAPA ARWIWDDGEP SPRNAWRCFR RTVTIDDDEP DARLRVTADT RYVAYVNGVR VGHGPVRGFP EHWFVDDWEV GHLLRPGANV VAVLVRHDGV ATFSSLRARG GLLAQLDLPA SSTHVVSDPS WQVATHAGFD ARSPRICPQL AFVEVVDGAW QPTWTTDVAE PATDDGWAPA TVVGEPGQGP WSRLVARDVP ALAEELVRPV RVGSLAFVRA APTSWTLDAR ALFDPSSEHH ANPSSYVGFL LTAIRVHRPA RVRIALPLAT SNGRVSGVAL DGAWTPVSDL AAGHADLRTL DVDLASGDHW LALDVSAYDH GYPVPVMLEA LDGADVALVH PTQGDAATPW VALGPVGAPD PAFERPLAHP ALERMTPTPE TRGAVVEATA ARELGAWPHA ARTVPAELAF PASLYGVVVH PSERDAVVVP SAVQALAGGG SAAVPHRPGR DTELVLDLGV EASGFVELEL TAPPGVVVDV YGFEYLRDGY REETTGMENA LRYTTRTGRQ RHVSPVRRGL RYLQLVVRRP DDAAGPVVLH DVAVRSAHYP MPRTGEFSCS DTRLDAIWEM SRRTVVACAE DTFVDCPAYE QAYWVGDAYS SARFASALAD VGPLVERCLR LVPGSRGQTP LLGSQVPSGW TNVIPAWTFF WVLACEEHAV RSGDPGFARD LAPDVVAALD AFAEHLDERS LLAIDAWNLL DWAPMDQPNS GVVAHQNCLY VMALDGAARL ADAVGLDVGE RLRARASAVR AAIAEHLWSP EREAYLDAIH ADGRRSDVVS VQTQLFALLA GVGDDSRLAR LTSLVVDPPH DLVQIGSPWM SIFRYDALVA AGRADVALAD LRRDYGGMLD AGAVTCWEMF PAPDRASLTR SHCHAWSAAP AAFLPNVVLG VRLDGPRRVV VDPQPLGLDW ARGAIPLPGG GRVEVAWERR ADGTLDVRVD APDGVEVGR
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