| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3618 |
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| Symbol | |
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| ID | 7860960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4025137 |
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| End bp | 4026780 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643867721 |
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| Product | hypothetical protein |
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| Protein accession | YP_002883622 |
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| Protein GI | 229822096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.216975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC ACGAGAGCAA ACCGACGTCG TCGCACGGCG GACTCACCCG CCGCACCGCC
CTCACGCTCG GCGCCGTCAC GGCGCTCGCG GGCGTCACGG CCACGGCCGC CCAGGCCGCA
CCGGCGCCGT CCCGCCGTCC CCTCTTCGAC GTCCGCGACT TCGGCGCCGT GGGCGACGGC
GTCGTCGACG ACACCGACGC CTTCAACCGC GCTCTCGACG CCGTCGAGGC GAACGGCGGC
GGCACCGTGT ACTTCCCGCC CGGCACTTAC CCCGTCTCCG GGAACGAGCC GGCCATCATG
CGCGACAACC TGGACATCGT GGGCGAGGAC GCCACGATCC TCAAGGCGGT GCGCAACGGC
TCGACGTTCA TCTCGCTCTC CCGCGGCCGC ACGGGGTACG GCTCCGGGGT CCGCAACCTG
CGGGTCCGGG GGCTGCGCTT CCTCGGTTCC TACGCCGGGG TGCGGCTGCA GTGCCCGTTC
GCGCTGCACC ACGCGTCGAA CGTCGTCATC GAGGACTGCG TGTTCGAGCA GGTGCAGGGC
TCCCGGCACT GCGTGGACCT CGGCGGCTGC GAGGACGTCG TGATCCGGCG CTGCACGTGG
CTGGGGTTCT ACAACAACGA GGGGCCCGCC TACGCGGGTG CCGAGTGCAT CCAGGTGGAC
TACAGCTACT CCGGCGCCCT CTCCTACACG GACTCGCCGG GATCCCACGA CGGGCTGCTG
TCGCGCCGGA TCACGGTGGA GGACTGTGAG TTCCTCCCGC TGGTGGCCGA CGGCGTGACG
TACCCGTGCC CGAACCCGCT CGGTATCCAC GGGGTGAAGG AGGACGCGCA GTACTCCGAC
ATCGTGTTCC GCCGGAACCT CGTGCTCGAT CCGGGCGAGG GGCCGGCGGC GGCGTGGCCG
GACGACCCGA CGAAGGAAGC CACCGCCTAC GCGCGCGGCG TCGTGCACCT GCCCACCACC
CGCCGGGTCC GCATCGAGGG CAACACGTTC CGGCAGACCA CGGGCCGCGT GACCCGGGCG
CTCTCGTTCG GGGCGGCGTC GTACGTGATC ACGACCGGTT CCGACCCCAA CACGTTCCCA
CCCACGAAGA CGGTGCTGGC GTCGCCCGTC GGGTGCGACG ACATCCGGAT CACCAACAAC
GTGTTCGAGG GCTTCGCCCC TGGGCACGCT GACGCACCGG CACAGGAGGC CGTGTGGTTC
CACGGCCTGC CGAACGGCGG CGAGATCCGC GACGTCGTCG TGTCGGGCAA CACGTTCCGC
GACCTCGACG CCGGCGGGAT CCCCACGGCA CCCGCGATCT CGGCGACGCA CGCCACGGGG
CTGCGTGTCG AGAACAACGC GTTCTCCTCC GCCAGCCGCG CGATCTGGAC CGCGGAGACG
ACGTCGGACG TGCGGATCCG CGGCAACAGG GTCGTCGGCG CGACGGGCGC CACCGGTGCG
GACCCGGCCG TCGCCGTGCA CTCCACGGGC TACTCGGTCA TGCACAACGA CCTCGACGGC
GGCTCGCCGC GCCCCGGCGT CGCCATCGAG ATCGGCGCCG GCACGCACGG CCGCGTGATG
CACAACGCGG TCAGCGACTA CGACGTCGTC GTAGTCGCTC CCGACCCGCT CCCCCACGAC
GTGGTCGTCC GGCACAACGG CTGA
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| Protein sequence | MSSHESKPTS SHGGLTRRTA LTLGAVTALA GVTATAAQAA PAPSRRPLFD VRDFGAVGDG
VVDDTDAFNR ALDAVEANGG GTVYFPPGTY PVSGNEPAIM RDNLDIVGED ATILKAVRNG
STFISLSRGR TGYGSGVRNL RVRGLRFLGS YAGVRLQCPF ALHHASNVVI EDCVFEQVQG
SRHCVDLGGC EDVVIRRCTW LGFYNNEGPA YAGAECIQVD YSYSGALSYT DSPGSHDGLL
SRRITVEDCE FLPLVADGVT YPCPNPLGIH GVKEDAQYSD IVFRRNLVLD PGEGPAAAWP
DDPTKEATAY ARGVVHLPTT RRVRIEGNTF RQTTGRVTRA LSFGAASYVI TTGSDPNTFP
PTKTVLASPV GCDDIRITNN VFEGFAPGHA DAPAQEAVWF HGLPNGGEIR DVVVSGNTFR
DLDAGGIPTA PAISATHATG LRVENNAFSS ASRAIWTAET TSDVRIRGNR VVGATGATGA
DPAVAVHSTG YSVMHNDLDG GSPRPGVAIE IGAGTHGRVM HNAVSDYDVV VVAPDPLPHD
VVVRHNG
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