Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3617 |
Symbol | |
ID | 7860959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4021040 |
End bp | 4025104 |
Gene Length | 4065 bp |
Protein Length | 1354 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643867720 |
Product | hypothetical protein |
Protein accession | YP_002883621 |
Protein GI | 229822095 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.10482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.364448 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGACC CGCAACTGCG CGCGCTGCTG ACCGACCCTC CGACCCGCTT CGGCCCCACC CCGCTGTGGT GGTGGTCCGG CGAACGCGTC ACGCGCGAGC GCCTCACGTG GCAGCTGGAC CGCCTGCGGG AGGGCGGCGT GCACGACGTC GTCGTCATCA ACCTCGCGCC CGCCGGACCG GTGTTCGGCG CGACACCGGA CGCCCCCGCC TGGTTCAGCG ACGCGTGGTG GGAGCTGTTC CAGCATGTGT GCGACGAGGC CGGCACGCAC GACATGCGCG TCTGGTTCTA CGACCAGATC GGGTTCTCCG GAGCGAACGT CCAGGGGCGC GTCACGCTCG ACCACCCGTG GGCGGCGGGG CGGCAGCTGC ACGCCGCGAC GCGGCGGCTG ACCGACGGCG TCGTCCCGCT GCTGCCGGGC GAGGAGCTGC TCGCCGTGTT CGACGAGACG TGGCGTGAGC GGATCCGGGC CGACGACGGC GCGGTGGGCG GGCGCCGGGC CCGGGACGGC GAGACCGTGC GGGCGGTGGT CACGGCGCCG ACGGCGTTCG ACTACCTCTC GCCCGACGCC GTCGCCGTGC TCCTCGACCA GGTGCACGGC GAGTTCGACC GCCGCGTCCC CGAGCACCTC GGCAGCGTCA TCGTGGGGAG CTTCCAGGAC GAGCTGTCGG CGATGGGCAC GTGGACGCCC CGGTTCGCCG AGGAGTTCCG AGCGCTCGCG GGCTACGACC TGCTCGACCA CCTGCCCGCG CTGTTCACGG GCACGGACCG GAGGGCGCGC GGGGTGCGGG CCGACTACCA GCGTGTGCGC GCCCGGCTCG CGGAGGACGC GTTCTTCCGG CCGCTCGCGG CCTGGCACAC GGAGCGGGGC ATGGTGGTCG GGGCGGACCA GAGCCATCCG GCTCGCGCCG GGTACCCGGC GCAGTCGGTG CAGATCTACG GCGACTACGC CCGCACCCAC CGCTGGTTCG GCGCCATCGG CAGCGACCAC GAGGGCGACG CCAAGGTGCA CAGCTCGCTG GCGCACCTGT ACGGGCACGA GCGGGTGTGG ATCGAGGCGT TCCACTCCAG CGGCTGGGGC GCGACGCTCG AGGAGACGTA CGACTGGCTG CTGCCGTACC TGCGCGCCGG GGCCAACCTC TACAACCCGC ACGCCACGTA CTACTCCACG GTCGGCGGCT GGTTCGAGTG GGCGGCGCCG GCCACGGACT GGCGGCAGCC GTACTGGCCG CACTACGCGG CGTTCGCGCG GGCGGTCGCC CGGATCGCGG CCGCGATGTC CTGGGGCACG TTCAGCGCGC ACGTCGCCCT GCTCGACCCG ACCGCCACCG CCCAGGCCGT GCTGCCGGTC GACCTCTCGA TCGACCATGC CGGGCGCCGT CCGTTCACCG GCGCCGAGGC CGACGCGCAG GAGGCGCAGC GCCTCTACCT GGAGCTGCGG GGCGTCACGG ACTGGTGGGC GCCACGCACC GGCACCCTCG ACGACGCCGG CGTGGCGTTC GACGTGATCG ACGACGACTC CCTCCAGCGC GCGTCCTCCT CCTCGCCCGG CGTCCTCGCG ATCCGCGAGC AGCGCTACGA CACGGTGCTC CTGCCGGGGA CCCGGACCCT CGAGACGGGC ACGGCCGAGG CCCTCGTCCG CCTGCTCGAC GACGGCGGCC GCGTCGTCGT CGTCGGCCCG GCGCCGCAGG AGGCGGCCGG GCTGCGCGGG GCGGACGACG TCGTCGCGCG CCTGGCTGCA CACCCGCGTC TCGAGAGGGC GCCCGACGCC GGGACGGCGG CGCGCCTCGT GTCCGGTCAG GGCGACTACG CGACGGCGGA CGTGCCGGTG CTCGTGCGCC GGAGCGGGGT CAGCGCCGCC GCGCTCGTGA CCACGGCCAG CCCGCGGGCG TCGGACGTGC TCGGGCGGGG GGCCGACGCG TACCGCGCCG CGGACGTGAC GTTCGACCGC GCGCGCTACG CCGCCGAGGT CGAGCTGCGC GTGGCCGCCG CCGTCGCGGA CGTGGAGGTG TGGGATCCGG CAACCGGGGA GTCCTGGCCG GCCGACGCCG TCACGAGGGC CGGCGGCGCC ACGATCCGCG TGCGCACGGG CGGGGCCCCG GCTCTCGTCG TGACGTGGAG CGAGGCGGGC GCCGCTGCTC CCGTCGGCGC GCGGGCCGAC GACGCCGCGG GCAGACCGCC GCTCGCGACA CGGGACGGCG CCGCCGTCGT CGATGTGAGT TACGGCTGGA CCGGCACCCT CGAGCCGATG CCGGACGACC GGTGGGGAGA CCTCGGCCGC CCCACCGGAG CCCGCCGGGA CGAGGTCGAG GTGTGGGACC TGGAGGTGGA CGAGGGCGGG ACCTGGGCCC CGTTCCGTGC GACGTTCGGC GAGACCGTCC GCGTCCGGAC CCTCCCGGCG GACGCCGCTG ACGACGTCGC ACTCGACGCC GCGGCGTGCT CCGCCGTCGT CGGCGGCGTG CGCCCGCTGG CGGACGAGTC GTGGGCCCGC GTCACGTACT CCGCGAGCCG CGGGCGCTCC CGCGACACGA CGAGCCCTCT CGGCGGCAAG GGCCGGGTGC TGAGCGAGTT CCTCGCCGTC ACCCCGCCGG ACGACGGCGA GCGCGTCGCC GTCCGCGTCG TGGTGCGGAC CGACCACCGG GGACCGGCCG ACCTCGTGCT CCTCAGCAGC GCCCCGAAGC GCGTCTGGTG GAACGGCGTC GAGCAGGCCG TCGACGACGC GTACGCGGCG GTCGCGCGCG TCGAGACGAC GCACGAGGTC AACGTGCTCG AGTACCACCT CGGGCGCTCG CGCACCCGGC GCTCGAGCCT CGGGGAGCCG GTGCTCGGCT CCGGCTTCGG GCTCGGGGCA CCCGGCACGT GGGACGGTCG ACCGGAGTAC CTGTCGCCCG CGCTCGTCGC AGGTGCTCCG AGCGGCGGGG CCGTCCGCTT CCGAGGGCGG CTGCACCTGG CGTCGGATGC GGAGTCGGCG CGCCTGGTCG TCGGGGCGAC GACGGCGGCC CGCATCCGGC TCGACGGCCG CACCGTCGCC CGGCAGGAAC GCGTCGAGTA CTACGCGGAC CACGACGAGA AGGTCCCGAT GTTCTTCGGG CACGACCTGC CGGGCCTCGC CGCCGGCGAC CACGTGCTCG AGCTGCTCCT GGAGCACGGC ACGTGCGACG ACGTCGTGTA CGCCGACCTG GTGGCGTTCG GCCCGGGCGG GGCGTCGGTG CTCGCGAGCG ACGGCACCTG GAGCGTCACG ATCGACGACG TCGAGGTCGG AGCCCGCGTC CGAGGCGACC AGTGGACGGA CGTCGACGCG GCGCACGCCG CCCGCCGCGC GCACCCCCTG CCGCGCACGG ACTGGCTGCT CGGACCGCCC GAGATCGGCG CCCCGGCGCT CGCCGTCTCG GTCTCCGACG CCGCGACGCC GCTCGGCCGC CGATTCCGCG TGCGGCTCCC GGCGGGGACC GTGCGTGTCG CGCTGCCCGT CGACGGCGTG CGTCGCGCCA CCGTGGACGG TCACGAGCTG GAGGTCGTCG ACGGCGTCGT CCGCCTCGAC CCCCTGCCCG AGCCGACGTC GATGCTGCTC GAGACCGGAC CCTCGCCCGT CGGGGCGGGC TCCCTCTGGC GGGGACCGGC TCGCATCCGG ACCACGACCG CGCCGCTCCC GCTCGGGGAC TGGCGGGACC TGGGGCTCGC CTCCTGGAGC GGCGGCGTCA CCTACCGCAG GAGCGTGGCG CCGCCGCCGG GCACTCCCTG GGTGCTCGAT CTCGGGCACG TGCGCGGCGC CGTGCGGGTG AGCGTCGAGG GGGAGGTCGT GGCCGAGGCG TTCTGCGCTC CGTTCCGCTT CCCGATGGCC CCGGTCGCCG GGTCCGTGGA GGTGGCCGTC CGCGTGGTGA ACACGCTCGG GCCGCATCTC CACGCGTCGA CGGCGTCGGC GTGGACCTTC CCCAGCCAGC TGTCCTCCGG CCTGTTCGGC CCCGTGACGA TCGCGGCGGC GGGCGACGAC GTCCGAACGG CACGATCCGC CCACCTCGTG GACGCATCAC CCACCCGTCC CGCCTCACGC GTCGGGCAAC CTTGA
|
Protein sequence | MTDPQLRALL TDPPTRFGPT PLWWWSGERV TRERLTWQLD RLREGGVHDV VVINLAPAGP VFGATPDAPA WFSDAWWELF QHVCDEAGTH DMRVWFYDQI GFSGANVQGR VTLDHPWAAG RQLHAATRRL TDGVVPLLPG EELLAVFDET WRERIRADDG AVGGRRARDG ETVRAVVTAP TAFDYLSPDA VAVLLDQVHG EFDRRVPEHL GSVIVGSFQD ELSAMGTWTP RFAEEFRALA GYDLLDHLPA LFTGTDRRAR GVRADYQRVR ARLAEDAFFR PLAAWHTERG MVVGADQSHP ARAGYPAQSV QIYGDYARTH RWFGAIGSDH EGDAKVHSSL AHLYGHERVW IEAFHSSGWG ATLEETYDWL LPYLRAGANL YNPHATYYST VGGWFEWAAP ATDWRQPYWP HYAAFARAVA RIAAAMSWGT FSAHVALLDP TATAQAVLPV DLSIDHAGRR PFTGAEADAQ EAQRLYLELR GVTDWWAPRT GTLDDAGVAF DVIDDDSLQR ASSSSPGVLA IREQRYDTVL LPGTRTLETG TAEALVRLLD DGGRVVVVGP APQEAAGLRG ADDVVARLAA HPRLERAPDA GTAARLVSGQ GDYATADVPV LVRRSGVSAA ALVTTASPRA SDVLGRGADA YRAADVTFDR ARYAAEVELR VAAAVADVEV WDPATGESWP ADAVTRAGGA TIRVRTGGAP ALVVTWSEAG AAAPVGARAD DAAGRPPLAT RDGAAVVDVS YGWTGTLEPM PDDRWGDLGR PTGARRDEVE VWDLEVDEGG TWAPFRATFG ETVRVRTLPA DAADDVALDA AACSAVVGGV RPLADESWAR VTYSASRGRS RDTTSPLGGK GRVLSEFLAV TPPDDGERVA VRVVVRTDHR GPADLVLLSS APKRVWWNGV EQAVDDAYAA VARVETTHEV NVLEYHLGRS RTRRSSLGEP VLGSGFGLGA PGTWDGRPEY LSPALVAGAP SGGAVRFRGR LHLASDAESA RLVVGATTAA RIRLDGRTVA RQERVEYYAD HDEKVPMFFG HDLPGLAAGD HVLELLLEHG TCDDVVYADL VAFGPGGASV LASDGTWSVT IDDVEVGARV RGDQWTDVDA AHAARRAHPL PRTDWLLGPP EIGAPALAVS VSDAATPLGR RFRVRLPAGT VRVALPVDGV RRATVDGHEL EVVDGVVRLD PLPEPTSMLL ETGPSPVGAG SLWRGPARIR TTTAPLPLGD WRDLGLASWS GGVTYRRSVA PPPGTPWVLD LGHVRGAVRV SVEGEVVAEA FCAPFRFPMA PVAGSVEVAV RVVNTLGPHL HASTASAWTF PSQLSSGLFG PVTIAAAGDD VRTARSAHLV DASPTRPASR VGQP
|
| |