Gene Bcav_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3506 
Symbol 
ID7858398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3899682 
End bp3900761 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content74% 
IMG OID643867606 
Productprotein of unknown function DUF1006 
Protein accessionYP_002883510 
Protein GI229821984 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.862952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.204168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGC TGGATCGCGA CGAGGCGCGG CGGATCGCCG TGCGCGCGCA GCTGCTCGAC 
GTGCCCCAGC CGACGGAGCT GGTCGACATG GTGGATCGCC TGACGCTGCT GCAGATCGAC
CCGACGGCGG CGGTGGCGCC GAACGCGGAC CTGGTCGCGT GGAGCCGGCT GGGCGCCGGC
TACCGACCCG CGGACCTGAC GCGGGCGCAG GAGGTGGAGC GTTCGCTGTT CGAGCTGCGC
GCGATGATCC GCCCCGTGAC GGCGCTGCCG TGGCAGGTGC CGGAGGTCAC GGACTACCTC
GCGCAGCCGT CGATCGCGCA CTGGATCGAG GCCAACGACG CCTTCCGCCG CGACGTGCTC
GCGCTGCTGC GCGACGCCGG GCCCTTGCCC TCGCGGGACG TGCCGGACAC GGCGCAGGTG
CCGTGGGGCT CGACCGGGTG GACCAACAAC CGGAACGTCA CGCAGATGCT GGAGTTCCTG
TCGGCGCGCG GCGAGGTGGC CGTCGCGGGG CGGGTCGGCC GGCAGCGGGT CTGGGACGTG
CCCGAGCGCG TGTACCCGCC GTTCGAGCCC TTGTCCCCGG AGGCGGCGAA ACGGCGGCGC
GACGAGCGAC GGCTGCGCGC GCTCGGCATC GCGCGGCCGG GCCGGAAACC GGTGCCCGGG
GAACCGACGT CCGCGGGCGA GCTCGGCGTC CCCGTGGTCG TCGAGGGCGT CGACGGCGAG
TGGCGGGTCC ACCCGGACGC CTTCGACGGC GAGTTCACCG GCCGGACGGC GCTGCTGTCG
CCGTTCGACC GGCTGATCCA CGACCGCGAG CGGGCGCTGG ACCTGTTCGG CTTCGAGTAC
CTGCTGGAGA TGTACAAGCC GGCGGCCAAG AGGCGTTGGG GGTACTTCGC GCTGCCGATC
CTGCACCACG ACCGGCTCGT CGGGAAGCTG GACGCGAAGG CCGACCGCAA GGCGGGGACG
TTCACCGTGA ACGCGGTGCA CGAGGACGTC CCGCTCAGCG GTGCCGTGCG CGACGACGTC
GACGCCGAGA TCGCCGCCCT CGCAGGCTGG CTCGGGCTCG AGCTCCTCCG GGCCGGCTGA
 
Protein sequence
MRRLDRDEAR RIAVRAQLLD VPQPTELVDM VDRLTLLQID PTAAVAPNAD LVAWSRLGAG 
YRPADLTRAQ EVERSLFELR AMIRPVTALP WQVPEVTDYL AQPSIAHWIE ANDAFRRDVL
ALLRDAGPLP SRDVPDTAQV PWGSTGWTNN RNVTQMLEFL SARGEVAVAG RVGRQRVWDV
PERVYPPFEP LSPEAAKRRR DERRLRALGI ARPGRKPVPG EPTSAGELGV PVVVEGVDGE
WRVHPDAFDG EFTGRTALLS PFDRLIHDRE RALDLFGFEY LLEMYKPAAK RRWGYFALPI
LHHDRLVGKL DAKADRKAGT FTVNAVHEDV PLSGAVRDDV DAEIAALAGW LGLELLRAG