| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3492 |
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| Symbol | |
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| ID | 7858384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3886073 |
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| End bp | 3886984 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643867592 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_002883496 |
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| Protein GI | 229821970 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.706922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGG GAGTGAGGAC GCAGCCCAGC CCCCGCCGCC GGTACGACGC CACCGCGTAC
CGGTGCGCGC GCGTGGTGCT CGCCGACTAC TCGACGTCCT TCAGCGCCGG CACGCGGCTC
CTGGACGCGC GCACCCGCGC CTACGTCGAG TCGATCTACG CACTCGTGCG CATCGCCGAC
GAGATCGTCG ACACGTTCGC GGCGCAGGGA CCCGCGAGTC CTGGGCAGTC CCGCGACCAG
CTCGAGGCAC TGCGGACCGA GACGGAGGCA GCCCTGGAAC GCGGCTGGTC CACGAACGTG
ATCGTGCACG CGTTCGTGCT CACCGCCGCC CGCGTCGGGA TCACCCGGGC GGAGACCGAC
CCGTTCTTCG CGTCGATGGC GATGGACCTC GACGTCCGCG ACCACGACCG AGCGAGCTAC
GAGCGCTACG TGTACGGCTC GGCGGAGGTC GTGGGCCTCA TGTGCCTGCG GGCGTTCCTC
ACGGCCGGCC GGCCCGCGGG GGCCGCAGCC CTCGAGCCCG ACGACGACGC GCTCACCGGC
GCTCGCGCAC TCGGCGCCGC GTTCCAGAAG GTCAACTTCC TGCGCGACCT CGGCGACGAC
GCCGGGCGCC TCGGGCGTGA CTACTTCCCG GCGGCGCACG GCGGGGTCCT CGACCACGGC
GCGCTGCTCG AGATCCTCGA CGAGATCGAG GAGGACCTGG CGCTCGCGCG CGATGCGCTG
GCGGCGCTGC CGCCTCGCCC GCGGGCGGCC GTCACCGTCA CGCTCGAGCT CTACACGGAG
CTGTTCGACA CGCTCTCCGC GATGACCCCG GAGGAGATCC GCGCGACACG GGTGCGGGTC
CCGGACGTGC GGAAGGCGCT CGTCGCGGGC CGCGCGATGA GCCGGAGCTG GCTCGCTGAC
CACCGTGACT GA
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| Protein sequence | MMLGVRTQPS PRRRYDATAY RCARVVLADY STSFSAGTRL LDARTRAYVE SIYALVRIAD
EIVDTFAAQG PASPGQSRDQ LEALRTETEA ALERGWSTNV IVHAFVLTAA RVGITRAETD
PFFASMAMDL DVRDHDRASY ERYVYGSAEV VGLMCLRAFL TAGRPAGAAA LEPDDDALTG
ARALGAAFQK VNFLRDLGDD AGRLGRDYFP AAHGGVLDHG ALLEILDEIE EDLALARDAL
AALPPRPRAA VTVTLELYTE LFDTLSAMTP EEIRATRVRV PDVRKALVAG RAMSRSWLAD
HRD
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